Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02609 ATGAATTTGGGTGATCTCAACAAGGTTTGGGAAGTCAAAGCTCTGAAGAGGAAGCCAGAGGAAGAAAAAGCCAAAAAGATGTTGGAGAATATAGCCAAACAGGTGCAGCCAATCATGCGCAAACACAATTGGAGGGTGAAGCTTCTCTCTGAATTCTGTCCAAGCAATCCGTCTCTTCTGGGGTTGAATGTCGGTGCTGGTATACATGTGAAGTTGCGGCTACGGAGACCAAACAGGGATTTGGATTTTTACCCATTTGATCAAGTTCTGGATACGATGCTTCATGAGCTTTGCCATAATGCACATGGTCCTCATAATGCCAACTTCTACAAGCTCTGGGATGAACTTAGAAAGGAATGTGAAGAGTTGATGACTAAGGGAATAACCGGCTCTGGAGAGGGGTTTGACCTTCCAGGAAGGCGTGTAGGTGGTTATTCCCGGCAACCTCCACTTTCATCTCTACGCAAAACTGCACTGGCAGCTGCAGAAAAGAGATCACGATTGGGATCTCTTCTTCCATCTGGACCAAAACGTCTTGGTGGTGATAGTGTTATAATGGAGGCACTTAGTCCAGTACAAGCTGCTGCAATGGCTGCAGAAAGGAGATTACAGGATGACATATGGTGTGGTTCTCAATCTTGCAAACATTTGGATCAGGAAGATGTTAACTATGAGTCTGCTGAGAACCTTGTAAATAAGCGGAAAAATGTGGGAAGCTCAAGACTAACAGATAATTCTACTCTACCTTCGGATCCAATGTCTCGAAAAAAAAGTCGTGCTAAGGATTCAAGTTTACTGGTTCAGTCATCCAGTACTTCCAAATTTGTAGATTTGACTATGAATACACCAACAATTGGATCTGTCATTGAACATCAAACCGGACCTCAAGGAAGAAGTTTTGGATTAGAAAGTATTTCACATTCTCAATCCAATTCTCAGGCAGGATCCAGTTCTTCAAAATTTTCAAGTCTGTCTGGGTCACTATCTGGTGATAATAGCACACTTCATTCTGAAGAACCTGCAATGTGGGAGTGTCCAATGTGCACTCTGTTGAATAAAACATTGGCTCCTATATGTGAATTGTGTGGCACGCAACAGCCAAAAGATGTTATTACCAAGTGCAACACTTGGTCTTGTAAATTCTGCACGTTGGAAAACAGTGTGAAGTTGGAGAAATGCTCAGCCTGTGACCAGTGGAGATACTCTCATGGCCCACCAGTGTCAACCCGGGCTCCTAACCTTGGCACTTAG 1251 0.4365 MNLGDLNKVWEVKALKRKPEEEKAKKMLENIAKQVQPIMRKHNWRVKLLSEFCPSNPSLLGLNVGAGIHVKLRLRRPNRDLDFYPFDQVLDTMLHELCHNAHGPHNANFYKLWDELRKECEELMTKGITGSGEGFDLPGRRVGGYSRQPPLSSLRKTALAAAEKRSRLGSLLPSGPKRLGGDSVIMEALSPVQAAAMAAERRLQDDIWCGSQSCKHLDQEDVNYESAENLVNKRKNVGSSRLTDNSTLPSDPMSRKKSRAKDSSLLVQSSSTSKFVDLTMNTPTIGSVIEHQTGPQGRSFGLESISHSQSNSQAGSSSSKFSSLSGSLSGDNSTLHSEEPAMWECPMCTLLNKTLAPICELCGTQQPKDVITKCNTWSCKFCTLENSVKLEKCSACDQWRYSHGPPVSTRAPNLGT* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02609 416 ProSiteProfiles Zinc finger RanBP2 type profile. 339 368 IPR001876 -
Rops11g02609 416 MobiDBLite consensus disorder prediction 287 336 - -
Rops11g02609 416 ProSiteProfiles WLM domain profile. 1 204 IPR013536 -
Rops11g02609 416 SUPERFAMILY Ran binding protein zinc finger-like 338 366 IPR036443 -
Rops11g02609 416 ProSitePatterns Zinc finger RanBP2-type signature. 377 396 IPR001876 -
Rops11g02609 416 ProSiteProfiles Zinc finger RanBP2 type profile. 373 402 IPR001876 -
Rops11g02609 416 SMART zf_4 341 365 IPR001876 -
Rops11g02609 416 SMART zf_4 375 399 IPR001876 -
Rops11g02609 416 PANTHER DNA-DEPENDENT METALLOPROTEASE WSS1 1 415 - -
Rops11g02609 416 ProSitePatterns Zinc finger RanBP2-type signature. 343 362 IPR001876 -
Rops11g02609 416 MobiDBLite consensus disorder prediction 232 253 - -
Rops11g02609 416 MobiDBLite consensus disorder prediction 232 266 - -
Rops11g02609 416 Pfam WLM domain 8 204 IPR013536 -
Rops11g02609 416 Gene3D - 336 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02609 Rops-Chr11 44622128 44625245 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02609 K22685 - gmx:100795976 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02609 11 44622128 44625245 Rops11g02609 11 44622128 44625245 ECH