Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02580 ATGCAGCAGCTCCGGCCGGCTACTCTGGCGTCCCTCATGGCGGCGTTGCTCCTGTTCTCCGCCTTCGCCACCACGACAAAAGCACACAACATCACTCACATCCTCGCCAAGCACCCGGAGTTCTCCACATTCAACCACTACCTAACCATAACTCACCTCGCGGCGGAGATCAACCGCCGGACGACAATCACCGTCTGCGCCGTTGACAACGCCGCCATGAGCGACCTCCTTTCAAAGCACCCGTTGATAACCACGGTCAAGAACATCCTATCCCTCCACATCCTCCTCGACTACTTCGGAGCCAAGAAGCTTCACCAAATCACCAACGGCACCGCACTCGCCGCCACAATGTACCAAGCCACAGGCACAGCACCTGGATCTTCAGGATTCGTCAACATCACCGACCTTCGCGGCGGAAAAGTCGGATTCGGCGCCGAGAATAACGGCGGAACTCTCTCCGCATCTTTCGTTAAATCCGTTGAGGAAGTTCCTTATAACATTTCAGTTATCCAGATCAGCAAGGTTCTTCCCTCGGCTGCAGCGGAAGCTCCTACACCCGCACCTAGCCAACAAAACCTCACTGCTATTATGTCGAAACACGGTTGTAAAGTCTTCGCTGACACGCTTTCTGCTAATGCTGATGCTTATAACACCTTCACCGACAACATTGATGGTGGATTAACCGTTTTCTGCCCCGTTGATGATGCTTTCAAGGCCTTTCTTCCGAAGTTCAAGAACCTAACCGCTTCCGGTAAGGTGGCTTTGCTAGAGTTTCACGGCGTTCCGGTTTATCAGTCCATTGCTATGCTTAAATCTAACAATGGAGCTCAGAACACTCTTGCTACCGACGGTGCTGAGAAGTACGATTTCACTGTACAAAACGACGGTGACCAGGTTACGCTTAAGACTAAAGCGGTTACCGCTAAGATCACTGATACCATCATTGATGACCAGCCATTAGCGATCTTTGCTATCAACAAGGTTCTTCTTCCGAGGGAATTGTTCAAGGCTGAGGCTCCGGCGCCGGCACCTGCGCCGGAACCTGCTGCTGCTGATGCTCCTGAGGCGCCGAAGAAGAAGAAGAAAACCAAGAAGGCTGCTGATGCTCCTGCTGATTCCGATTCCGACGCTCCTGCTGATTCGCCGGGTGATGCCGCCGATGAGTCCGCCGATGACAGTAACGGCGCCGTTAGGTTTTACGGTAACGGTGCCTGGTACGTTAACGGTATTCTGTTTTTGGCTTTGGTTTTTGGCTTTCCACTGTTGTGA 1269 0.5256 MQQLRPATLASLMAALLLFSAFATTTKAHNITHILAKHPEFSTFNHYLTITHLAAEINRRTTITVCAVDNAAMSDLLSKHPLITTVKNILSLHILLDYFGAKKLHQITNGTALAATMYQATGTAPGSSGFVNITDLRGGKVGFGAENNGGTLSASFVKSVEEVPYNISVIQISKVLPSAAAEAPTPAPSQQNLTAIMSKHGCKVFADTLSANADAYNTFTDNIDGGLTVFCPVDDAFKAFLPKFKNLTASGKVALLEFHGVPVYQSIAMLKSNNGAQNTLATDGAEKYDFTVQNDGDQVTLKTKAVTAKITDTIIDDQPLAIFAINKVLLPRELFKAEAPAPAPAPEPAAADAPEAPKKKKKTKKAADAPADSDSDAPADSPGDAADESADDSNGAVRFYGNGAWYVNGILFLALVFGFPLL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02580 422 ProSiteProfiles FAS1/BIgH3 domain profile. 189 329 IPR000782 -
Rops11g02580 422 Pfam Fasciclin domain 202 331 IPR000782 -
Rops11g02580 422 FunFam Fasciclin-like arabinogalactan protein 2 27 169 - -
Rops11g02580 422 SUPERFAMILY FAS1 domain 185 332 IPR036378 -
Rops11g02580 422 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 394 IPR033254 -
Rops11g02580 422 Gene3D FAS1 domain 26 172 IPR036378 -
Rops11g02580 422 ProSiteProfiles FAS1/BIgH3 domain profile. 28 176 IPR000782 -
Rops11g02580 422 Gene3D FAS1 domain 173 332 IPR036378 -
Rops11g02580 422 MobiDBLite consensus disorder prediction 339 393 - -
Rops11g02580 422 SMART fasc_3 64 179 IPR000782 -
Rops11g02580 422 SMART fasc_3 228 332 IPR000782 -
Rops11g02580 422 FunFam Fasciclin-like arabinogalactan protein 10 182 332 - -
Rops11g02580 422 SUPERFAMILY FAS1 domain 34 176 IPR036378 -
Rops11g02580 422 MobiDBLite consensus disorder prediction 353 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02580 Rops-Chr11 44104717 44105985 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02580 - - cam:101502229 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02580 11 44104717 44105985 Rops11g02580 11 44104717 44105985 ECH