Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02577 ATGTCTCTTGGGTATGCTGAGAAACTTTCCTACATAGAAGATGTGGGCAACGTTGGAATGGCCGAATATTTCGACCCATCTTACGTTTTGAATGAAAAAATAGAGCGACTTGCTGTCATGATAAAAAAGAGTAAGCATCTAGTGGTGTTTACAGGTGCAGGAATATCAACTTCTTGTGGAATACCTGATTTTCGAGGTCCCAAAGGAATTTGGACGCTTCAGCGAGAAGGTAAAGCCTTGCCCGAGGCATCATTGCCATTTCATCGCGCGGTGCCGAGCTTGACTCACGTGGCTCTGGTTGAATTAGAAAAGGCTGGTATTTTGAAATTCGTTATCAGTCAGAATGTTGATGGTCTTCATCTTCGGTCTGGAATACCGAGGGAGAAACTCGCTGAATTGCATGGGAATTCCTTCATGGAAACTTGCCCTTCTTGTGGAGCTGAGTACTTTCGTGATTTTGAGGTAGAAACTATTGGTTTAAAAGAGACATCACGTCGCTGTTCAGATGCAAAATGTGGGACAAGACTTAGGGATACAGTCCTTGACTGGGAGGATGCCTTGCCTCCAAAGGAGATGGATCTAGCTGAGAAGCACTGCAAACAGGCAGATATAGTGTTATGCTTGGGGACAAGTCTGCAAATAACTCCAGCATGCAACTTGCCTCTTAAAGCACTTCGAGGTGGAGGTAAAGTTGTCATTGTAAATCTCCAGAAAACTCCAAAGGACAAAAAAGCCAGTTTAGTCATACATGGGTTTGTTGATAAGGTAATTACAGGTGTCATGGACCAGCTTAATCTGCAGATTCCTCCGTTTGTCAGGATTGATCTTTTCCAGATTATTCTAGTGCAAGCTTTGAGCAATGATAAAAGATATGTGAACTGGACCCTCCAGGTTGCCAGTGCCCATGGACAGAAAGCGTCATTGCCTTTCATCAAGTCTGTCGAGGTCTCCTTCTTAGACAAGGAAGATTACAAAGCAGCCATTCTGGATAAGCAACCATTTCGGCTTAAAAGGAGAACAGCATATAACAAAGCATTTGAAATGGTTCTGAAACTCAATTTTAGTGAAGGCTGTGGTTGCTCATCCCTTGAAATTGATGTACCGGTTGATTTTAAGGTTTCAACTGACTGCTTCAACTTTGATAAGGACATCATATTCCAAAAGCTGAGAGACAAGGCAGTTCTTGAATCAAAATGTGGTCAGAATGCTGTTATTGAGAGAAAGACCATCTTGACACCTAGAAGTGATGTCACTACCTATGCCATTGTGACCAATGTTGTTCAGTACAGCAAAACATGTAAAGCAGTCCCTGATTCTCTAAGTAATGGTGATCTTAAGAAAAGAAAAGCAAGCATGACTGGTACAGGATCATCTAGGAAGCGTTCAAAAGGTTCTAAGTGTAAATCTAGATCAGAGAAGAGTTAG 1425 0.4218 MSLGYAEKLSYIEDVGNVGMAEYFDPSYVLNEKIERLAVMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAVPSLTHVALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMETCPSCGAEYFRDFEVETIGLKETSRRCSDAKCGTRLRDTVLDWEDALPPKEMDLAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQKTPKDKKASLVIHGFVDKVITGVMDQLNLQIPPFVRIDLFQIILVQALSNDKRYVNWTLQVASAHGQKASLPFIKSVEVSFLDKEDYKAAILDKQPFRLKRRTAYNKAFEMVLKLNFSEGCGCSSLEIDVPVDFKVSTDCFNFDKDIIFQKLRDKAVLESKCGQNAVIERKTILTPRSDVTTYAIVTNVVQYSKTCKAVPDSLSNGDLKKRKASMTGTGSSRKRSKGSKCKSRSEKS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02577 474 Gene3D - 37 262 - -
Rops11g02577 474 MobiDBLite consensus disorder prediction 440 474 - -
Rops11g02577 474 FunFam NAD-dependent protein deacetylase SRT1 135 184 - -
Rops11g02577 474 SUPERFAMILY DHS-like NAD/FAD-binding domain 5 292 IPR029035 -
Rops11g02577 474 ProSiteProfiles Sirtuin catalytic domain profile. 27 267 IPR026590 -
Rops11g02577 474 PANTHER NAD-DEPENDENT HISTONE DEACETYLASE HST4 34 266 - -
Rops11g02577 474 FunFam NAD-dependent protein deacetylase sirtuin-6 isoform X2 36 134 - -
Rops11g02577 474 Gene3D YEATS domain 272 382 IPR038704 -
Rops11g02577 474 Gene3D - 135 184 - -
Rops11g02577 474 CDD SIRT7 45 251 - -
Rops11g02577 474 Pfam Sir2 family 87 216 IPR003000 GO:0070403
Rops11g02577 474 Pfam Sir2 family 52 75 IPR003000 GO:0070403
Rops11g02577 474 MobiDBLite consensus disorder prediction 446 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02577 Rops-Chr11 44058411 44070282 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02577 K11416 - gmx:100803586 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02577 11 44058411 44070282 Rops11g02577 11 44058411 44070282 ECH