Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02570 ATGAAGCCACAGAATCTTCTTCCTTCCTCGGCACTATCACGTGCTCTCTCACGTGCCCTAACCACCTCCACCACCACCGCATCGCCGCAATGTTCATCGGCGTTTCCTCTAAAGACGGTGACCACCGCAAACTTCGAGCCCTCACTGTCGGAGCTCCATCGCCATGTCCGGTCATCGGACTTCGTCGCCATCGACCTTGAGATGACCGGCATTACCAGCGCTCCCTGGCGTGAGTCATTTGAGTTCGATCGCTCCGACGTACGATACCTCAAGGTCAGAGACTCTGCGAATAGGTTCGCCGTCGTTCAATTCGGTGTTTGCCCCTTCCGATGGGATCCTTCCAACCACTCCTTCATCGCTTATCCGTACAATTTCTATGTTTTTCCACGTCAGGAGCTTGCGGGTTTCGGTCCATGTAATGAATTTCTCTGCCAGACTACTTCAATGGATTTCTTGGCTACATACCAGTTTGATTTTAATGCATGCATACATGAAGGAATATCTTATTTATCCAGAGAACAAGAAAGGGAAGCAATAAGGAATTTGCATTCAACATATGATAGTGAGTGGTCAGACATTTGTAAATTAAAAGATGTTAGGGACACATCGGTCAGCATGGCAGACATTTTGTTCACTGCACGAATGAAAAATAAGTTCAGTGAATGGCATGATGGGTTATTACAGGAGCAAAATCAAGAAGACCAAATTCAAGGAATTTCAAAAGACTCAAAACAACAATTTGAAGTAATTTTCTTTAAGATGCATCCAGCTCTCAGGCTTAATGGATTCACCTCTCATCAGCTCAAATTGATTAAGTTGGTCATCAGAAAGCACTTCAAAGATCTTTTTTATGTCAGTGTGAACAGTGAGACTTCTGGTTCACAACATATAGTTGTATATGCAGACTCAAAGGATGAACTAAACTTACTTCTGAAGGAGGTGAAAGAGGAAAATCACAGGGTGGAAGAGATGAAGATCCAAGCTGCGGTGGGATTTCGCCATGTTATTGATCTCCTTTCATCAGAACAGAAGTTGATAGTTGGTCACAACTGTTTTCTGGATATTGCTCATGTCTACAGCAAATTTATCAGTCCTCTTCCAGGGTCTCCTGAAGAGTTTGTTGCCTCTGTTAACAAGTGTTTTCCACACATTGTTGATACCAAAATACTCTTGAACACTAATTATATGCTACAAGAAAGGATGAAAAGGTCCAGAAAATCACTGGCCTCTGCATTTACTTTGTTTTGTCCACAAATTGCCGCAGGCTCTAGAAGCACTGGCTTAAGTTCACCATCACATGTGAAAGTGGACATTGAAGTTGATGATTTGAGATCATCCAGCTGGAACCCTGGAGGCAAGCATGAGGCAGGATATGATGCTTTCATGACTGGAAGCATCTTTGCCCAGTTATGCAGTGATTTAGGGGTCGATTTTAAACTCCATGAATCTTCAAAACAATTAGCCTTCAATGAGAAACTACAGAAGTACGTCAATCATCTATATCTTAGTTGGATGCATGGGGACATTATTGATATAAATACTGGTTGTAAGGTTGCAGATTCTTCTCCAAGCTATAGCCCCAGGAAGCGGTACCCAAAAATATTGTTTGAGAACATTGTTATTATTTGGGGATTTCCTTCTAAGCTGAAGGCAAGTGAAGTAAGAGAGTGTATATCTAAAGTTTTTGGTCAAACTTCTGTAGTGTCTGTCTACCACTTGGATGCAACTGCAGTGTTCGTTCAGTTTAACAAGACTGAACTAGTTTCCGATTTTCTTTTGTTGAAAGACACCTTAGAGAGAAGTGATGGTCCAATCGCCGTTTTGAATCCGCTCTCAAAACTTTTGGATGGAGGAAATACATGTGCTGCTAATTATGATACTTATAAAGAAATATGTGGTTCTCCCTTATCAGAAAGTCTCTTTGCTGATCAGGCAAAGGCAGTGGGCATAAAATGGAAGACCAAATTGATAGAATACAAGGTACCATTGGGGAGTGAAGAACAAGAAAATCCAAGTGTAAAAGATAATGCAAATACAGATATGAAGTTTGTAGAAAGGACCAAGCCAAACACAATTGATCAGTTAAGAAATGCTCCACCTAGTGGGCAAATCTCATCTTTTGGGATTGAAGATTCTTGTGGTGCTGCAGAAGCCAACTTGTGA 2163 0.4166 MKPQNLLPSSALSRALSRALTTSTTTASPQCSSAFPLKTVTTANFEPSLSELHRHVRSSDFVAIDLEMTGITSAPWRESFEFDRSDVRYLKVRDSANRFAVVQFGVCPFRWDPSNHSFIAYPYNFYVFPRQELAGFGPCNEFLCQTTSMDFLATYQFDFNACIHEGISYLSREQEREAIRNLHSTYDSEWSDICKLKDVRDTSVSMADILFTARMKNKFSEWHDGLLQEQNQEDQIQGISKDSKQQFEVIFFKMHPALRLNGFTSHQLKLIKLVIRKHFKDLFYVSVNSETSGSQHIVVYADSKDELNLLLKEVKEENHRVEEMKIQAAVGFRHVIDLLSSEQKLIVGHNCFLDIAHVYSKFISPLPGSPEEFVASVNKCFPHIVDTKILLNTNYMLQERMKRSRKSLASAFTLFCPQIAAGSRSTGLSSPSHVKVDIEVDDLRSSSWNPGGKHEAGYDAFMTGSIFAQLCSDLGVDFKLHESSKQLAFNEKLQKYVNHLYLSWMHGDIIDINTGCKVADSSPSYSPRKRYPKILFENIVIIWGFPSKLKASEVRECISKVFGQTSVVSVYHLDATAVFVQFNKTELVSDFLLLKDTLERSDGPIAVLNPLSKLLDGGNTCAANYDTYKEICGSPLSESLFADQAKAVGIKWKTKLIEYKVPLGSEEQENPSVKDNANTDMKFVERTKPNTIDQLRNAPPSGQISSFGIEDSCGAAEANL* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02570 720 Pfam CAF1 family ribonuclease 40 467 IPR006941 -
Rops11g02570 720 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 40 633 - -
Rops11g02570 720 SUPERFAMILY Ribonuclease H-like 38 480 IPR012337 -
Rops11g02570 720 Gene3D - 297 514 IPR036397 GO:0003676
Rops11g02570 720 Gene3D - 39 247 IPR036397 GO:0003676
Rops11g02570 720 Coils Coil 300 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02570 Rops-Chr11 43829187 43834233 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02570 K01148 - gmx:100784997 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02570 11 43829187 43834233 Rops11g02570 11 43829187 43834233 ECH