Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02568 ATGTATGATGGGGATACAGTCCATGCTTCATTTGTTGTGATCGGCATTGATACAACTTGGCAATATACTCAAGATGGTTTAGACCTTGTGGTGAAGGGACCTTCTGGTGAACAAATTCAAGATTTTCGTGACAAGATAAGTGAGAAATTCGAATTTGCGGCACGAAACAGAGGACCCTACCGTTTCTGCTTCACCAATAAGTCTCCATATCGTGAAAAAGTTGATTTTGATGTGCATTCTAGCCACTTTTCAACCTATGAACAGCATGCACAAGATGAGCATTTTAACCCTTTGTTAGAACACATACTGAAGTTACAGCAAGCTCTTTTTAACATTCAGTATGAACAGCATTGGCTTGAAGCTCAGACAGAACGCCAGGCAATAGTAAACAATGCAATGAGCTCCAGAGCACTACACAAGGCCATGCTTGAATCAGCAGCACTAATTGGTGCCAGCACCCTCCAAGTTTATCTTCTTCGCCGCCTCTTCGAAAGAAAGCTTCGCGTATAG 510 0.4235 MYDGDTVHASFVVIGIDTTWQYTQDGLDLVVKGPSGEQIQDFRDKISEKFEFAARNRGPYRFCFTNKSPYREKVDFDVHSSHFSTYEQHAQDEHFNPLLEHILKLQQALFNIQYEQHWLEAQTERQAIVNNAMSSRALHKAMLESAALIGASTLQVYLLRRLFERKLRV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02568 169 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 3 167 IPR015720 -
Rops11g02568 169 Pfam emp24/gp25L/p24 family/GOLD 4 164 IPR009038 -
Rops11g02568 169 SMART EMP24_GP25L_2 2 164 IPR009038 -
Rops11g02568 169 ProSiteProfiles GOLD domain profile. 1 80 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02568 Rops-Chr11 43792909 43794954 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02568 - - egr:104450412 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02568 11 43792909 43794954 Rops11g02568 11 43792909 43794954 ECH