Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02518 ATGGCTTCTCCCAATCAAGCACAACCACCTCCACCACCTTTCGATATGCACTCTTTCTTCAATCCCCCAAACCCAAACCCAACCCCAAACCCTAACCCTAACCCTAACCTCTCTTCTTCCCCATTCCCTCCTTCTTCCTCTTACCCTCCACCGAGTGTTCCCTTCTCCGGCGCCGGAACCATCCCCTTCCCCCACCATAACAACAATAACAACTTCCCCTTCGACCACCACCACCATCTCCAAATGCACCAGCACCACCCCCTTCGTTCTCTTTCTTTCCCCACTCCACCTCTTCAACCTCAACCCATTCCTCCCCCTTCAAATCCGAACGCCGGTGCTCGTCTCATGGCCCTTCTCAGCGCCCCTCCTCCGCCGCAACAACCTGCCGCCGTTCCGCCCTTGACCGCTGCCGCGGCCGCCCTTGTTCGTCTTCCCAGTAGTAAGGTCCCCAAAGGAAGGCATTTGATTGGTGACCATGTTATGTATGACGTGGACGTTAGGTTGCCCGGTGAGGTTCAGCCTCAGCTTGAGGTTGCTCCGATTACGAAATACGGGTCGGATCCTAACCCGGTTCTGGGTCGGCAAATTGCGGTTAATAAGTCTTATATATGTTATGGATTGAAACAAGGGAATATCAGGGTGTTGAACATTCACACTGCATTGAGATCTTTGCTCAGAGGCCACAATCAGAGGGTCACAGACTTGGCATTCTTTGCTGAAGATGTTCATCTCTTGGCTAGTGTTGGCACAGATGGCCGTGTCTATGTGTGGAAGATCTCTGAAGGTCCCGACGATGAAGATAAGCCTACAATTACTGCCAATATTGTTATTGCTGTCCAAATAGTGGGAGAGGAGAAAGTTGAACATCCTCAAATATGCTGGCACTGCCACAAACAAGAGGTTTTGATAGTTGGTATGGGAAAGCATGTTTTGAGAATTGACACCACTAAAGTTGGAAATGGTGAAGCCTTTGTGGCAGAGGATCCTCCAAAATGTCCTGTTGACAAGCTCATTGATGGGGTTCAGCTTGTAGGCACACATGATGGGGAGGTGACTGATTTGTCGATGTGCCAATGGATGACAAATCGATTGGTATCTGCCTCACAGGATGGCACGATAAAGATATGGGAAGAACGGAAGACACAACCTCTTATGGTTTTGAGACCACATGATGGGCATCCTGTTTTTTCTGCCACATTTTTTACTGCTCCACACCAGCCCGATCATGTTGTCCTTATCACTGCAGGACCACAAAATCGGGAAGTGAAGCTTTGGGTCTCAGCAAGTGAAGAAGGTTGGCTGCTCCCTAGTGATGCCGAATCTTGGAAATGCACTCAGACGTTGGAGTTGAAGAGTTCAGATCAACCATCTCATAAGGATGCATTCTTTAATCAAGTTGCAGCATTGTCTCATGCAGGTCTGCTTTTACTTGCAAATGCTCAGAGGAATGCTATATATGCTGTGCACTTAGAATATGGTCCTAATCCAGAATCAACACGCATGGATTATATAGCTGAGTTTACTGTGACCATGCCCATTCTGAGTTTTACTGGAACAAGTGATATATTACCTCATGGTGAACATATTGTTCAGGTTTATTGTGTTCAGACACAGGCTATTCAGCAGTATGCTTTAGACTTAGCACAATGCTTGCCTCCACCGTTGGAAAATGTGGGACTAGAGAAGTCTGATTCCAGTGTTTCCCGAGATGCTATTACTGCTGAAGGATTTGCCTCTTTAGACTCATCTGCAGGTAGAACATCCGAAATGTCTTTAGCTGGTTCTGCTCCCAAAACAATGATACAAGCAAGCAGCAATGAGAGTGGTCATGTGGCAAGATACCCTTTAAGCTCTGGCCATATCGAGGCACCTATTTCTAAAGAAATCAGCAGTTCAAATATTGAAGCTAAACCTGTTACATTGGCTCCTTCTAGTAGTGATGCTGATATTATTTGTGTTCCTTCTCCATCTCTTCCTTTGAGCCCAAGGTTGTCCAGAAAGCTTTCTGATTTCAGGAGTCCACAATCTAACTTGGGTGATCATGTTGGGGACCAACCTGTTGATTATTTAGTAGACAGACAAATGGATACCATTCACAGGAACTTGTCTGACCCATTGAATAATGATTCAAAGAATGATGAAAAGAAAGTCAAACAGGACGACATTTCTAGTGTACTTAGTCCTTCTGTCTTGTTTAAGCAACCAACTCATCTGGTTACACCGTCTGAGATCATAAAAGCTGGTTCCTCCTCTGAGACTAATATTATCGATAGAAAGAATGAGGAAGAAGCAAAGATCCAGGATGTGGTTGATGTGGGTAATACTGAAGTGGAAGTGAAAGTGGTAGGTGAAGCAAGATCTAATCAAATTGATGATTTTGGCCGGCAGGGGCCACAACAAAACCCAGTTTCTGATAGTAAAGAAAAATTCTTCTGCTCTCAGGCCTCTGATCTTGGTATTGAGATGGCCCGAGAATGCCGCGCGATATCTGGAGAGACTTACATTGCAATGGAACCTGGACAAGTTGATTCTATTGTAGGGCACTCACTGGCCCAACCTTCTAATGCCGGTGAGGATGGACTACAAGACTTGGCAAAAGATGTCCATGAAAAGGTTTCTGACTCATCTACATCCATGGCAGTACCACCGTCGCCCGCACCTAATACAAAAGGGAAGAGACAAAAGGGTAAAAATTCTCAAGCATTAGGTCCATCTTCCCCATCTCCAAGTGGGTGCAATTCAACTGATTCGTCCAATGAACCAAATGGAAGTTCAAGCCTCCCATCTACAGAAAATCCTCAAATTCTGGCAATGCAAGAAACAGTCAACCAGTTATTGACAATGCAAAAAGAGATGCAGAAACAAATGACAATGATGGTTGCTGTTCCAGTTACAAAAGAGGGTAGAAGGCTAGAGGCTGCCCTAGGGAGAAGCATGGAAAAAGCTGTCAAGGCCAACGCTGATGCTTTATGGGCTCGAATTCAAGAGGAGAATTCAAAAAATGAAAAGTTGTTACGAGACCGTATCCAACATGTTACAGGTTTGATTAGTAACTTTATGAATAAGGATCTACCAGCAATATTGGAGAAAACAGTAAAGAAGGAAGTGGCTTCAGTTGGGCCAGCTGTAGTCCGTGCAATGTCTCCTGCTGTGGAGAAAATAATATCTTCTGCTATTGTGGAGTCTTTCCAGAGAGGAGTGGGTGATAAGGCAGTGAATCAACTTGATAAATCGGTTAGTTCAAAACTTGAAGCTACTGTAGCTAGGCAAATCCAAGCACAATTTCAGACAACTGGCAAACAGGCGCTTCAGGATGCACTCAAATCCAGTTTTGAAACATCGGTGGTTCCTGCATTCGAGATGTCATGTAAAGCCATGTTTGAGCAAGTAGATGCCACATTTCAAAAAGGCATGGGTGAACATTCAACTGCTGTGCAGCAACGCCTTGAATCTGGCCCTACTTCGTTGGCAATGACTCTAAGGGATTCCATTAATTCAGCATCATCAGTTACTCAAACGTTGAGTAGAGAAGTGCTCGAGGGTCAGAGAAAGTTAATGGCATTGGCAACGGCAAGAACAAACTCAGGCACATTAAATCCTCTGCCCATTCAGCTCAACAACGGTCCTTTACTTCATGAAAAGGTTGAGGTACCACTCGATCCCACAAAGGAGCTAGCAAGGTTAATTTCTGAACGGAAATATGAGGAGGCATTCACTGGAGCTCTACAAAGAAGTGATGTATCCATCGTATCTTGGTTGTGTTCTCAGGTTGATTTACATGGACTTTTGTCAACGGTTCCTCTTCCTTTAAGCCAAGGTGTAGTGCTTTCACTTCTGCAGCAATTGGCTTGTGATATCAACAACGATACATCTCGGAAGCTTGCGTGGATGCCAGATGTGGCTGCTGCCATAAATCCCTCAGACCCCATGATTACAATGCACGTGCGTCCCATCTTTGAGCAAGTCTATCAGATACTGAATCATCAAAGGAGCTTGCCTGCAATGACTGGAGCTGATCTCTCAAGTATCCGTCTCTTATTGCATGTCATCAATTCTATGCTCATGACATGTAAATGA 4077 0.4508 MASPNQAQPPPPPFDMHSFFNPPNPNPTPNPNPNPNLSSSPFPPSSSYPPPSVPFSGAGTIPFPHHNNNNNFPFDHHHHLQMHQHHPLRSLSFPTPPLQPQPIPPPSNPNAGARLMALLSAPPPPQQPAAVPPLTAAAAALVRLPSSKVPKGRHLIGDHVMYDVDVRLPGEVQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTALRSLLRGHNQRVTDLAFFAEDVHLLASVGTDGRVYVWKISEGPDDEDKPTITANIVIAVQIVGEEKVEHPQICWHCHKQEVLIVGMGKHVLRIDTTKVGNGEAFVAEDPPKCPVDKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEERKTQPLMVLRPHDGHPVFSATFFTAPHQPDHVVLITAGPQNREVKLWVSASEEGWLLPSDAESWKCTQTLELKSSDQPSHKDAFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGPNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPPPLENVGLEKSDSSVSRDAITAEGFASLDSSAGRTSEMSLAGSAPKTMIQASSNESGHVARYPLSSGHIEAPISKEISSSNIEAKPVTLAPSSSDADIICVPSPSLPLSPRLSRKLSDFRSPQSNLGDHVGDQPVDYLVDRQMDTIHRNLSDPLNNDSKNDEKKVKQDDISSVLSPSVLFKQPTHLVTPSEIIKAGSSSETNIIDRKNEEEAKIQDVVDVGNTEVEVKVVGEARSNQIDDFGRQGPQQNPVSDSKEKFFCSQASDLGIEMARECRAISGETYIAMEPGQVDSIVGHSLAQPSNAGEDGLQDLAKDVHEKVSDSSTSMAVPPSPAPNTKGKRQKGKNSQALGPSSPSPSGCNSTDSSNEPNGSSSLPSTENPQILAMQETVNQLLTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRSMEKAVKANADALWARIQEENSKNEKLLRDRIQHVTGLISNFMNKDLPAILEKTVKKEVASVGPAVVRAMSPAVEKIISSAIVESFQRGVGDKAVNQLDKSVSSKLEATVARQIQAQFQTTGKQALQDALKSSFETSVVPAFEMSCKAMFEQVDATFQKGMGEHSTAVQQRLESGPTSLAMTLRDSINSASSVTQTLSREVLEGQRKLMALATARTNSGTLNPLPIQLNNGPLLHEKVEVPLDPTKELARLISERKYEEAFTGALQRSDVSIVSWLCSQVDLHGLLSTVPLPLSQGVVLSLLQQLACDINNDTSRKLAWMPDVAAAINPSDPMITMHVRPIFEQVYQILNHQRSLPAMTGADLSSIRLLLHVINSMLMTCK* 1359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02518 1358 MobiDBLite consensus disorder prediction 93 109 - -
Rops11g02518 1358 ProSiteProfiles Trp-Asp (WD) repeats profile. 344 386 IPR001680 GO:0005515
Rops11g02518 1358 Gene3D - 1270 1357 IPR044938 -
Rops11g02518 1358 MobiDBLite consensus disorder prediction 706 720 - -
Rops11g02518 1358 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 344 377 - -
Rops11g02518 1358 FunFam enhancer of mRNA-decapping protein 4 177 491 - -
Rops11g02518 1358 Gene3D - 164 274 IPR015943 GO:0005515
Rops11g02518 1358 MobiDBLite consensus disorder prediction 868 933 - -
Rops11g02518 1358 MobiDBLite consensus disorder prediction 700 720 - -
Rops11g02518 1358 MobiDBLite consensus disorder prediction 891 933 - -
Rops11g02518 1358 MobiDBLite consensus disorder prediction 1 110 - -
Rops11g02518 1358 SMART WD40_4 380 426 IPR001680 GO:0005515
Rops11g02518 1358 SMART WD40_4 340 377 IPR001680 GO:0005515
Rops11g02518 1358 SMART WD40_4 218 258 IPR001680 GO:0005515
Rops11g02518 1358 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 1 1356 IPR045152 GO:0031087
Rops11g02518 1358 SUPERFAMILY WD40 repeat-like 191 453 IPR036322 GO:0005515
Rops11g02518 1358 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 225 262 - -
Rops11g02518 1358 FunFam Enhancer of mRNA-decapping protein 4 1270 1356 - -
Rops11g02518 1358 ProSiteProfiles Trp-Asp (WD) repeats profile. 225 267 IPR001680 GO:0005515
Rops11g02518 1358 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 178 490 IPR032401 -
Rops11g02518 1358 Gene3D - 284 492 IPR015943 GO:0005515
Rops11g02518 1358 MobiDBLite consensus disorder prediction 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02518 Rops-Chr11 42922757 42931729 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02518 K12616 - gmx:100798228 2106.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02518 11 42922757 42931729 Rops11g02518 11 42922757 42931729 ECH