Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01974 ATGGCTTGCATGAAATTGGGTTCCAAAGCTGATGCTTTCCAGCGTCGAGGGCAGGCCTGGTTCTGTACGACCGGGCTTCCCAGCGATATAGTCGTTGAAGTTGGTGAGATGTCCTTCCATCTTCACAAGTTCCCTTTGCTCTCTAGGAGTGGGGTTTTGGAAAGAATGATTGCCAAAGCTTCTGAATCAGAGGAAGAATGCGTCATACACCTTCCTGATATTCCTGGCGGGGCCAAAACATTTGAACTTGTGGCAAAATTCTGCTATGGTGTGAAACTTGAACTTACTGCTTCAAATGTGGTGTACCTCTGGTGTGCTGCTGAGCATCTTGAAATGACTGAGGAATATGGTGAAGGTAATCTTATTTCACAGGCTGAAACCTTTTTCAATCAAGTGGTCCTTCGAAGTTGGAAAGACTCTTTGAGAGCACTTCAAACCTGTGATGATGTTCTGTCCAATGCTGAAGAGCTCCACATTGTGAAAAGGTGCATTGAATCACTAGCAGCAAAGGCATCTACTGACCCAAATTTATTCGGTTGGCCAGTACTGGAGCGTGGTGGGCCCTTGCAGAGCCCTGGTGGCAGTGTTTTGTGGAATGGGATAAGTACTGGGGCAAGACCAAAGAATTCAAGTTCAGATTGGTGGTATGAGGATGTAACGAATTTGAGTTTACCTCTTTATAAGACGTTGATAGCTGTCATGGAATCTCGAGGCATTCAGCCGGAGATTATTGCTGGTTCTATTGCTTTTTATGCTAAAATGTATCTACCTGGGTTAAATCGACGTCAGGTTTCTGGTGAGTCCACCCGTCTGACACAGGTGGCTTTGGGGTCTCCACCATGTGAAGAAGACCAGAAGATTCTGCTCGAAGAGATTGATCGGTTACTCCCAATGCAGAAGGGCCTGGTCCAAACAAAGTTCCTGTTTGGTCTACTTCGAACAGCCATGATTCTTCGAGTGGACCCTTCTTGCATATCAAATTTGGAGAAACGGATTGGGATGCAGCTTGATCAAGCTACTCTGGAAGATCTCTTGATGCCAAATTTCTCATATTCAATGGAGACACTTTACAATGTTGACTGTGTGCAAAGAATTCTTGATCATTTCCTTGCCATGGATCAGGTTACAGGTGGTGCCTCTCCGTGCTCAATTGATGATGGCCAGTTGATGGGATCACCTTCACTGACACCAATAACCATGGTAGCCAAGCTGATTGATGGTTACCTGGCAGAGGTTGCCCCAGATGTAAACTTAAAACTTCCCAAGTTTCATGCCCTTGCTGCTGCTGTTCCAGAGTATGCCAGGCCTTTGGATGATGGTTTATATCGTGCTATAGATATTTATTTGAAGTCTCACCCATGGTTGGTGGAGTCGGAGAGAGAGCAACTTTGTAGGCTAATGGACTGCCAAAAACTCTCATTAGAAGCATGCACCCATGCTGCACAAAATGAGAGGCTACCAATCAGGATCATAGTTCAAGTTCTATTCTTTGAGCAGCTCCAGCTTCGGACTTCAATCGCGGGTTGCTTTCTAGTTTCAGATAATCTTGATGGATCAAGACAGTTAAGAAGTGGTTTTGTTGGATCCAACGAGGGTGGCTGGGCGTCGGCCGTGAAGGAAAATCAGGTCTTGAAAGTCGGGATGGATAACATGAGGATGAGGGTATCTGAGCTTGAGCAAGAGTGCTCAAACATGAGGCAGGAGATCGAGAAATTGGGTCGTGTGAAGGGATCCAGCAGCGCTTGGGGAGCCGTGTCTAAGAAGCTTGGGTTTAAGCTAAAGTCTCAAATGTGCAGTGCTCAAGAAGGATCTGTTAGCAACCAGAATAATGGAAATAACAAGGTTGAAAAGTTGAAGGACAGACATGTAAAGCATACGAGAGGTTCTTCTATGAGTGACAAAGCATCAGTTTCTTCAATTATTCCTTCTTAG 1932 0.4534 MACMKLGSKADAFQRRGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLERMIAKASESEEECVIHLPDIPGGAKTFELVAKFCYGVKLELTASNVVYLWCAAEHLEMTEEYGEGNLISQAETFFNQVVLRSWKDSLRALQTCDDVLSNAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNSSSDWWYEDVTNLSLPLYKTLIAVMESRGIQPEIIAGSIAFYAKMYLPGLNRRQVSGESTRLTQVALGSPPCEEDQKILLEEIDRLLPMQKGLVQTKFLFGLLRTAMILRVDPSCISNLEKRIGMQLDQATLEDLLMPNFSYSMETLYNVDCVQRILDHFLAMDQVTGGASPCSIDDGQLMGSPSLTPITMVAKLIDGYLAEVAPDVNLKLPKFHALAAAVPEYARPLDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRQLRSGFVGSNEGGWASAVKENQVLKVGMDNMRMRVSELEQECSNMRQEIEKLGRVKGSSSAWGAVSKKLGFKLKSQMCSAQEGSVSNQNNGNNKVEKLKDRHVKHTRGSSMSDKASVSSIIPS* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01974 643 ProSiteProfiles NPH3 domain profile. 213 501 IPR027356 -
Rops11g01974 643 CDD BTB_POZ_NPY3-like 19 122 - -
Rops11g01974 643 SMART BTB_4 28 121 IPR000210 GO:0005515
Rops11g01974 643 PANTHER OS12G0117600 PROTEIN 22 599 IPR043454 -
Rops11g01974 643 Pfam NPH3 family 213 477 IPR027356 -
Rops11g01974 643 Coils Coil 541 575 - -
Rops11g01974 643 Gene3D Potassium Channel Kv1.1; Chain A 13 131 IPR011333 -
Rops11g01974 643 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Rops11g01974 643 MobiDBLite consensus disorder prediction 621 643 - -
Rops11g01974 643 Pfam BTB/POZ domain 27 113 IPR000210 GO:0005515
Rops11g01974 643 SUPERFAMILY POZ domain 17 114 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01974 Rops-Chr11 31902173 31906931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01974 8 571 EF-hand Containing Proteins AT3G44820 50.085 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01974 - - gmx:100794676 1187.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01974 11 31902173 31906931 Rops11g01974 11 31902173 31906931 ECH