Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01973 ATGGGCTGTGTTTTGTCAAGTATTGATGAGGATGGGAGGGTTGGCACCTGCAAGGAAAGGAAGAAGGTAATCAAACAGTTAGCGGGTATTAGAGAGGAGTTTTCTGATTCCCTGTTGGCTTATTTTAAAGCATTGAAGAACACTGGTGCCACCCTTAGGCAATTCACGGAGTCCGATACATTAGAATTTGAAATTGCCTCTCATGGCCTGGCTGAGCCACCTTCTCCACCGGCCCATCTGCTACCGCCACCACTGCCTCCTTTTCTTGCTGACATGACTGCAATGCAAGTTGCCCAAAAGGAAATACTAGAGAATGATGATAACTATGTTCCTACACTGCATATTGATCCAAGTATGAACTCATCACAGCTATTTCGACCCACTAATATAAAAAAAATGGTAGAATCAGTCGAGGAGGAGAATTGGGAAGAAGCCAAAACAGAATTTGAGGATGAAGTCCCAGATTTAGAAGCTGCTGTAAGTGTTGGAAAATCACGTAGTGGGAAGCAAAAGTCCATAGAACCAGCTGATGATAATTCTTCAGCAATGAGTTTGTATAGAAAAGACACTACTGCAGCTATGCCCATGGTGGTTGGTAGAAATGGGAAAACATTGGAGGGTATAGTTAAAGAGATAGATGATTATTTCCTGAAAGCATCAGCATGTGTAAAGGAAATTGCTGTTCTTATTGATGTCAGGGGAGGAGATACTCTTCTGAGGCAGAATTCTGGGCATCTCAATAGGAAGAGAGGCAATTCTGCAAAGGTCTTCAGTGTACTGTCATGGAGTCGTCATTCTAAGTCAACCCAGTTCACCAAAGATGCCGCTGATTTTTCTGGTCCTAGTGAACCATGTAGGCCTGGAGCTCATTGTGCCACACTTAAAAAATTATGCGCTGCGGAGAAGAAACTTTTCAAGGCAGTAAAGGAGGAGGGAGTTGCCAAATTGAAGTTTGAGAGGAAGTCCTTGTTATTGCAAAAGCAAGAGGATGAGAACACTGACATGGTCAAAATTGACAAAACTCGATCAAGTGTTGAGGAGTTGGAGTCTGATATAATAAGCCTAAGGCAGTCCATCAGTGAAACAACTTCATCAATTTTGGAACTTATAGATGAGGAGCTTTTACCCCAGCTGGTTGCATTAACTGCAGGGTTGGCACAAATGTGGAGGAAAATGCATGAGTGCCATCAGGCCCAAGCTCTCATCTCCCAGCAGTTGAGTAACCTCAGCGATTATCATAACACAATGCTAAATGCTGAACATCATCACCAGGCTACAATTCAGTTTGAGGCTGAGGCCTCTTATTGGTATAGTAGCTTTTGCAAACTTGTAAAATCTCAACGAGAGTACGTAAGGACCCTCTCTAGGTGGATTCAGCATACCAACTGCCTCAGGGATGGTCATGAATGTAGTGATCAATCTTCTATTCATACCATTTGTGAACAGTGGCAGCTTGGGCTTGACGCATTACCTGACAAGGAGGTCTCTGATGCAATAAAAAGCCTAATGTCATCCATCCGTGCCATAATTGACCAACAGGCCGAGGAAGATAACATTATGAGGAAGTTGGGAAAACTTGAAAGGAGGTTGCAAAAAGACTTGAACTCCCTTGAATGGAGCCTTGAAGATGATGGAACTATGGCTGATATAAGCCCCAAACATCCGTTATATCTTAAGAAAACCAGAATAGAAGCCTTAAAGAATCAAGTAGAAAGTGTGAAAGCAGATTATTTGGATTCTGTCCAGTATGGTAAGGCCATGACCCTAAATAACCTCAAAACTACACTTCCTCATCTCTTCCAGTCACTGATGGAATTTTCAAGTGCTTCAGCACAAGCTATGGAGGCTATCCATACCCAGTCAAGCCAGGAGAATGTGCAGTGA 1884 0.4294 MGCVLSSIDEDGRVGTCKERKKVIKQLAGIREEFSDSLLAYFKALKNTGATLRQFTESDTLEFEIASHGLAEPPSPPAHLLPPPLPPFLADMTAMQVAQKEILENDDNYVPTLHIDPSMNSSQLFRPTNIKKMVESVEEENWEEAKTEFEDEVPDLEAAVSVGKSRSGKQKSIEPADDNSSAMSLYRKDTTAAMPMVVGRNGKTLEGIVKEIDDYFLKASACVKEIAVLIDVRGGDTLLRQNSGHLNRKRGNSAKVFSVLSWSRHSKSTQFTKDAADFSGPSEPCRPGAHCATLKKLCAAEKKLFKAVKEEGVAKLKFERKSLLLQKQEDENTDMVKIDKTRSSVEELESDIISLRQSISETTSSILELIDEELLPQLVALTAGLAQMWRKMHECHQAQALISQQLSNLSDYHNTMLNAEHHHQATIQFEAEASYWYSSFCKLVKSQREYVRTLSRWIQHTNCLRDGHECSDQSSIHTICEQWQLGLDALPDKEVSDAIKSLMSSIRAIIDQQAEEDNIMRKLGKLERRLQKDLNSLEWSLEDDGTMADISPKHPLYLKKTRIEALKNQVESVKADYLDSVQYGKAMTLNNLKTTLPHLFQSLMEFSSASAQAMEAIHTQSSQENVQ* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01973 627 PANTHER UNCHARACTERIZED 1 621 - -
Rops11g01973 627 Coils Coil 139 159 - -
Rops11g01973 627 Coils Coil 338 358 - -
Rops11g01973 627 MobiDBLite consensus disorder prediction 160 182 - -
Rops11g01973 627 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Rops11g01973 627 Pfam Protein of unknown function (DUF632) 206 507 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01973 Rops-Chr11 31877827 31888983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01973 1 84 Acyl Lipid Metabolism Gene Families AT2G27090 35.106 1.21e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01973 - - gmx:100809759 822.772