Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01971 ATGCCCCAAACCTTAGACCCCGAAGGCCCCGAACCTTGGACCCTGGACTCGCCAAAAAATCTACAAGGCCCTAAGCTTTGGACCTCGAAACTGGCCAAAGTTACAGAGAGACTACGTGGAACAAGGATGGAGGAGAAAGAAGAAGAGAAGAGAGGAGTGAGAGTATTCGTGGGAGGATTAGGAGAAAACGTGAGTGGCGAAGATCTTCGTAGGTTGTTTGGGTCTCTGGGAACAGTTGAATCACTCGAAACAATCAGAACCATAGGTCGCAGTTTTGCCTACATTGACTTCCTCCCTTCTCCCTCTGACCCCAATTCCCTTTCCAAGCTTTTCAGCAAGTATAATGGATGTGTTTGGAAAGGTGGGAAGCTGAGACTGGAGAAGGCTAAAGAGCATTACCTTACGCGTTTGAAAAAAGAGTGGGAGGAAGATGCTAATGTTAATTCTCAACAACAACCTACTGATGTTTCCGCTCAAAAGGACTCGGAGGAAAAAACGGCAAACAAAAAACTCGGTTCGAATTCAATTACAAAGACCCTCAATATATTCTTTCCCAGATTAAGAAAGGTGAAATCCATACCATTGAGTGGATCCGGCAAGCACAAATACAGTTTCCAGAATATTAAAGTTCCTCCTCTTCCTGTGCATTTTTGTGATTGTGAGGAACATTGCAGTCCTTTTGTCACGGCAAGAGAAAAGGCATCTTTCGATGTGGCAGCTGAAATTGGTGGAATGAATGATGAAGAAATTAACATAATGAATGCTGTGATGAACAAACTATTTGAAAAGGAAATGGTTTCCAACACCCAGCATCTTGGAAAGGTGCAGGATTCTTTTGAGTCGCCTGATGCTTTACATTTAAATGAATGTGAAGTAGATAGTGCAACAGATGATGATGATCTCATAATTAACATAGAGACAACGAAAAATAAATCACCTTTAACTGGAAGCCAGGAACTTGAAAGGATCATGGAAAATCAGGAATCATGGTTGAATAAAACAAGAATTGCTAAGGAAGAACCCAACAAGAGTATGCTTCTGGTGCAGAAAAGGAGTAATAGCAATCCTAACAAGGTCAAGAAGAGAAAATCACTTCCTGAATTGGAAAACGAAACCCCTGGAGGTAAGAGTAATATGCAGACCCTTCCAGATGAGCTGGGATCTGGTGCACAACCTACCGAGCATGAATATGATTTTGGGGAATCAACTAAAGTTTCATGGTCTCAGAAGTCTTCATGGAGAAAACTTCTTGGTGAAGGAGGCAATACTGCTTTCAGTGCCTCTTTCATTTTGCCAAAGTTTGATTCTGGTAAAGATCAACAAAGATCTGATGGTCCTTGTGCACCCTTGTCTACAAATGACAAAACTGAAGACATGGCAAGTGATGGATCCCTAGAGAGCAAACCTACCGATACACAAGTGATAGAAGAGCCTGCTGAAACTCAACCTACCAATACACAAGCGATAGAAGAGCCTGCTGAAACTCAACCTACCAATAAACAAGTGATAGATGAGCTTGCCGAAGCTCATCATAATGTGGCACCAAAAAATACAGGCAGAGGTGATTCATGGCTGAAAAAGCAATCCTGGACACAACTGGTTAGTGCGGATAACACTTCATTTAGCATTTCACAAATTTTGCCTGGCATTTCTTTCCCAGAGCCAGTGGCTGAGGAGCCCATTGTGGACCCTGCCAATTCCAATGATTGCAAGCACAATGATTTAGATAAGGATGCTATTAGTGAAGTTGCTAGTGATGAGTTTAAGTTAGGGGAGATTATACCAGAGAAGAGTCAACATGCTGGTGCAACTGATATTGAAGATAGTCCAAGGGAAAGGTCCACCGCAGATGTTGAAATAGGCGAAACTTGCTCATTTATGAGAAGTGCTGCTTCTTTGAAAGAGTGGGCAAAAGCTAAGGCTGCTCTTAGTGGATCACTTAAAAGAAAGCGGAGTGAGAAGTAA 1965 0.4234 MPQTLDPEGPEPWTLDSPKNLQGPKLWTSKLAKVTERLRGTRMEEKEEEKRGVRVFVGGLGENVSGEDLRRLFGSLGTVESLETIRTIGRSFAYIDFLPSPSDPNSLSKLFSKYNGCVWKGGKLRLEKAKEHYLTRLKKEWEEDANVNSQQQPTDVSAQKDSEEKTANKKLGSNSITKTLNIFFPRLRKVKSIPLSGSGKHKYSFQNIKVPPLPVHFCDCEEHCSPFVTAREKASFDVAAEIGGMNDEEINIMNAVMNKLFEKEMVSNTQHLGKVQDSFESPDALHLNECEVDSATDDDDLIINIETTKNKSPLTGSQELERIMENQESWLNKTRIAKEEPNKSMLLVQKRSNSNPNKVKKRKSLPELENETPGGKSNMQTLPDELGSGAQPTEHEYDFGESTKVSWSQKSSWRKLLGEGGNTAFSASFILPKFDSGKDQQRSDGPCAPLSTNDKTEDMASDGSLESKPTDTQVIEEPAETQPTNTQAIEEPAETQPTNKQVIDELAEAHHNVAPKNTGRGDSWLKKQSWTQLVSADNTSFSISQILPGISFPEPVAEEPIVDPANSNDCKHNDLDKDAISEVASDEFKLGEIIPEKSQHAGATDIEDSPRERSTADVEIGETCSFMRSAASLKEWAKAKAALSGSLKRKRSEK* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01971 654 MobiDBLite consensus disorder prediction 334 404 - -
Rops11g01971 654 Gene3D - 28 173 IPR012677 -
Rops11g01971 654 MobiDBLite consensus disorder prediction 371 387 - -
Rops11g01971 654 MobiDBLite consensus disorder prediction 601 618 - -
Rops11g01971 654 PANTHER TRANSCRIPTIONAL REGULATOR 43 653 - -
Rops11g01971 654 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 55 97 IPR000504 GO:0003723
Rops11g01971 654 CDD RRM_NOL8 54 130 IPR034138 -
Rops11g01971 654 SMART rrm1_1 54 127 IPR000504 GO:0003723
Rops11g01971 654 MobiDBLite consensus disorder prediction 143 171 - -
Rops11g01971 654 MobiDBLite consensus disorder prediction 465 501 - -
Rops11g01971 654 MobiDBLite consensus disorder prediction 1 23 - -
Rops11g01971 654 MobiDBLite consensus disorder prediction 435 501 - -
Rops11g01971 654 MobiDBLite consensus disorder prediction 594 618 - -
Rops11g01971 654 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 53 131 IPR000504 GO:0003723
Rops11g01971 654 SUPERFAMILY RNA-binding domain, RBD 49 130 IPR035979 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01971 - - gmx:100778779 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01971 11 31868901 31874982 Rops11g01971 11 31868901 31874982 ECH