Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01964 ATGGCTTCAGGAAATGAAGAGAAAGTAAATATTGGTTTCAATGCAGCTCCTGAGACAAAACCAAAGAAGGATTGGATCCTTTTGTCTCTTAGGGTGGTTGCATTTTTGGCCACTGCATCTGCAACACTTGTGATGGCACTCAACAAACAGACCAAAAGCTTGATAGTTGCCACCGTTGGTAGCACTCCTATAAAAGCTACCATTACTGCAAAGTTTAATCAAACTCCAGCTTTTGTGTTCTTTGTGATAGCCAATGGAAATGCCAGTCTCCATAACTTGGTGATGATAGCATTGGATACATTTGGACCCCAATATGATTATAAAGGATTCCGGCTTGCATTGATTGCAATATTAGACATGATGACAATGGCACTGGCATCAGCTGGAGGTGGTGCAGCAACATTCATGTCAGAATTGGGAAGGAATGGTAATTCACATGCAAGGTGGGATAAAATCTGTGACAAAGTCGAAAGCTATTGCAACCGAGGTGGTGCTGCCCTCATTGCTTCTTTCATTGGCTTCATTCTCCTCCTGATTATTACAGTTATGTCCATTATCAAGCTGATCAAGCCAAATCGCATTAACCACGCTCCTTGA 597 0.4204 MASGNEEKVNIGFNAAPETKPKKDWILLSLRVVAFLATASATLVMALNKQTKSLIVATVGSTPIKATITAKFNQTPAFVFFVIANGNASLHNLVMIALDTFGPQYDYKGFRLALIAILDMMTMALASAGGGAATFMSELGRNGNSHARWDKICDKVESYCNRGGAALIASFIGFILLLIITVMSIIKLIKPNRINHAP* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01964 198 PANTHER CASP-LIKE PROTEIN 1U1 25 189 IPR044173 -
Rops11g01964 198 Pfam Casparian strip membrane protein domain 22 176 IPR006702 -
Rops11g01964 198 NCBIfam plant integral membrane protein TIGR01569 28 188 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01964 Rops-Chr11 31688695 31690414 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01964 - - gmx:100792043 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01964 11 31688695 31690414 Rops11g01964 11 31688695 31690414 ECH