Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01957 ATGGCGGCCTCTGATCCCAACAAATTGATAAGCAAAGCTGATAAGCTAACAAAACTCAGTCTTACAAGGTGGAGTGCAGATTGGAAAAGTGCTACTGGTCTTTATGAGCAGGCTGCTAATGCGTTTAGAGTTGCCAAGGACCGTGAGAAAGCCAAAATTGCATATGAGAAAGCTTCAAAAGGACAAGAGATGCTTTCTTCACCTTGGGATGCAGCTAAGCACATGGAATCTGCTGCTGGTTTGGCCAAGGAACTGAGCCACTGGAATGAAGTTGGGGACTTTTATCGAAGGGCATCTGAATTGTACATGGAGTGTGGGAGACCACAACCTGCATCAGATGCTCTCGCCAAGGGAGCGCGTGCTTTGGAAGATGCCATGCCTGAAGAAGCTATTCAGCTATATACAGATGCTTGTACAATTCTTGAAGAGGATGGAAGGGAACAGATGGCCTTTGATCTATATCGTGCTGCCACTAATGTTTATATAAAACTTGAGAAATATTCAGATGCTGCATCTTTCCTGTTGAGATTGGGCTTGGCAGCTGACAAGTGTAATGCTACCAATAGTCAGTGCAAGGCATATCTTAGTGCGATTATTGTCTACCTTTATGCTCATGACTTTAAGCAAGCAGAGAAGTGCTATAATGACTGCTCTCAGATTGATGCTTTTATCAGAAGTGATCAGAATCGTTGTGCTAGCAAGTTTCTTGCTGCCTACACAGATGGAGATATTGAAGAAATCAAACGTATTGCTCAGTCGAGCACTGTTTCAAATCTTGACCATGTGATCATTAGGCTTGCGAGGAAACTTCCAACAGGCGATGTGAGTGCATTGAAGGCTGCCACCGCTGAAGATGAAGAGCAGCCACTAGACGAAAATGACCTGACTTAA 891 0.4411 MAASDPNKLISKADKLTKLSLTRWSADWKSATGLYEQAANAFRVAKDREKAKIAYEKASKGQEMLSSPWDAAKHMESAAGLAKELSHWNEVGDFYRRASELYMECGRPQPASDALAKGARALEDAMPEEAIQLYTDACTILEEDGREQMAFDLYRAATNVYIKLEKYSDAASFLLRLGLAADKCNATNSQCKAYLSAIIVYLYAHDFKQAEKCYNDCSQIDAFIRSDQNRCASKFLAAYTDGDIEEIKRIAQSSTVSNLDHVIIRLARKLPTGDVSALKAATAEDEEQPLDENDLT* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01957 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 1 275 IPR000744 GO:0006886
Rops11g01957 296 FunFam Gamma-soluble NSF attachment protein 3 272 - -
Rops11g01957 296 Pfam Soluble NSF attachment protein, SNAP 5 261 - -
Rops11g01957 296 Gene3D Tetratricopeptide repeat domain 2 272 IPR011990 GO:0005515
Rops11g01957 296 SUPERFAMILY TPR-like 6 249 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01957 Rops-Chr11 31624257 31630344 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01957 K21198 - gmx:100790986 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01957 11 31624257 31630344 Rops11g01957 11 31624257 31630344 ECH