Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01936 ATGAAAGCGTACCTCTCTCATCAGTGGGCCCCTCATTTTATAACTAACCTTCCTCCTTTAGGGTTGCCAGCTCATCATTCCAAGGTGACACCTTTACAAAGGTGCTTCCTTTATCAAGATCTCACCTTTACCAAGGTGACACCTTTATCCTGGGCTTATGGCCCATTTCAACTCTCTGCTGTCTTGGGCTTTACGGATGAGGCCTCCAGACCACAAGCCCCCAGTTGTTTTGCATTGTGTGGTTTTGTTGCAATTGCATGTTGGTTGGTGTCCCAATTCAGTTTCAGATTTTTGGGCTGTTATTATTGGCTCCAGAACAAAGCCATGGCTGCAAAGAAGGTTTGTGAGTCATTTTCCAAGAGCTTGATTGAAGAGGTTCATAGATGGGGTTGCTTGAAGCAGACAGGGGTGGGTTTGAGGTACATGATGGAATTTGGGTCCAAACCTACTGATAAGAATTTGCTGATTTCTGCACAGTTCCTTCACAAGGAACTTGCCATTAGGATTGCTAGGAGAGCTATTGAACTTGAGAATCTTCCCTATGGTTTGTCTAAAAAACCTGCTGTTTTGAAGGTTAGGGATTGGTATGTGGATTCTTTCCGTGATCTTAGATCCCTCCATGAGATCAAGAATATGAATGATGAAAAAGAGTTCACTGATATGATCAAGGCCATCAAGGTGAGACACAACAATGTAGTACCTACAATGGCATTGGGTGTTCAGCAATTGAAGAAAGGTATGGATCCAAAGATTGTTTATGAAGATCTTGTTGAGATTCATCAGTTCCTTGACCGTTTTTACATGTCAAGAATTGGAATCCGCATGCTTATCGGGCAGCATGTTGAATTACACAATCCCAATCCTCCTCCCCATTGCGTGGGTTATATACATACAAAAATGTCTCCTGTGGAGGTGGCGAGGAATGCCAGTGAGGATGCACGCTCTATATGTTGTCGTGAATATGGCAGTGCCCCTGATGTCCACATTTATGGAGATCCTGATTTTACTTTTCCCAGCTATGTTCCAGCTCACTTGCATCTTATGGTATTCGAGTTGGTTAAGAACTCACTGCGTGCTGTCCAAGAGCGCTTTATGGATTCTGACAGAGTTGCACCTCCCGTCAGAATAATAGTTGCGGATGGAATAGAGGATGTTACTATAAAGGTCTCAGATGAGGGAGGTGGAATACCAAGAAGTGGTCTACCAAAAATTTTTACATATCTATATAGTACAGCCAAAAACCCATTGGATGAGCATTCAGATCTTGGAGTAGGTGATAATGTGACAATGGCTGGATATGGATATGGGCTTCCTATTAGCCGCCTATATGCTCGGTATTTTGGAGGTGATCTTCAAATAATCTCTATGGAAGGATATGGGACTGATGCATATCTCCATTTATCTCGGTTGGGAGATTCACAAGAACCTTTGCCTTGA 1437 0.4301 MKAYLSHQWAPHFITNLPPLGLPAHHSKVTPLQRCFLYQDLTFTKVTPLSWAYGPFQLSAVLGFTDEASRPQAPSCFALCGFVAIACWLVSQFSFRFLGCYYWLQNKAMAAKKVCESFSKSLIEEVHRWGCLKQTGVGLRYMMEFGSKPTDKNLLISAQFLHKELAIRIARRAIELENLPYGLSKKPAVLKVRDWYVDSFRDLRSLHEIKNMNDEKEFTDMIKAIKVRHNNVVPTMALGVQQLKKGMDPKIVYEDLVEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPPPHCVGYIHTKMSPVEVARNASEDARSICCREYGSAPDVHIYGDPDFTFPSYVPAHLHLMVFELVKNSLRAVQERFMDSDRVAPPVRIIVADGIEDVTIKVSDEGGGIPRSGLPKIFTYLYSTAKNPLDEHSDLGVGDNVTMAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLGDSQEPLP* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01936 478 SUPERFAMILY alpha-ketoacid dehydrogenase kinase, N-terminal domain 124 287 IPR036784 -
Rops11g01936 478 Pfam Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase 137 297 IPR018955 -
Rops11g01936 478 Gene3D - 299 477 IPR036890 -
Rops11g01936 478 FunFam [Pyruvate dehydrogenase (Acetyl-transferring)] kinase mitochondrial 299 477 - -
Rops11g01936 478 PRINTS Bacterial sensor protein C-terminal signature 431 449 IPR004358 GO:0016310|GO:0016772
Rops11g01936 478 PRINTS Bacterial sensor protein C-terminal signature 455 468 IPR004358 GO:0016310|GO:0016772
Rops11g01936 478 PRINTS Bacterial sensor protein C-terminal signature 385 399 IPR004358 GO:0016310|GO:0016772
Rops11g01936 478 Gene3D - 112 291 IPR036784 -
Rops11g01936 478 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 468 IPR003594 -
Rops11g01936 478 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 298 467 IPR036890 -
Rops11g01936 478 FunFam [Pyruvate dehydrogenase (Acetyl-transferring)] kinase, mitochondrial 114 291 - -
Rops11g01936 478 CDD HATPase_PDK-like 301 468 - -
Rops11g01936 478 ProSiteProfiles Histidine kinase domain profile. 345 471 IPR005467 -
Rops11g01936 478 SMART HKATPase_4 340 471 IPR003594 -
Rops11g01936 478 PANTHER PYRUVATE DEHYDROGENASE KINASE 115 478 IPR039028 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01936 Rops-Chr11 31260783 31274646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01936 K00898 - gmx:100785344 712.99