Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01889 ATGCTCTGCTTCTCTTCCCCTGTTTGGGTGTTCAATACTGCTACCCCACCTTTCATTTTGAAAGATCTTAGCTTCTCTGCACAATCATTGTGCTCAATGGCCAATGATCATTTGACCCGTTCTCACTCTTTCCGTGAGAGGCTTGATGAAACTCTCACTGGTCACAGGAATGAAATTTTGGCCCTTCTGTCAAGGATTGAAGCCAAGGGTAAGGGAATCCTGCAACACCATCAGGTCATTGCTGAGTTTGAAGAAATCCCTGAGGTGAATAGGCAAAAACTGATTAATGGGGCCTTTGGAGAAGTTTTGAGATCTACCCAGGAAGCCATAGTGTTGCCACCATTTGTTGCTTTGGCTGTTCGTCCAAGGCCTGGTGTTTGGGGATATCTTCGTGTGGATGTGCATGGGCTTGTTGTTGATGAGTTGCGTCCTGCTGAGTATCTGAAATTCAAGGAGGAGCTTGTTGAAGGAAGTGCTAATGGTAACTTTGTGCTTGAGTTGGACTTTGAACCATTTAATGCATCCTTCCCTCGACCAACACTAAACAAGTCAATTGGAAATGGTGTTGAGTTTCTCAACCGTCATCTTTCTGCTAAGCTCTTCCATGGCAAGGAGAGCATGCAGCCACTGCTTGAATTCCTCAGGCTTCACAGCCATAAGGGAAAGACTATGATGTTGAATGACAGAATTCAAAACCTGAATTCTCTCCAACATGTTTTGAGAAAAGCAGAAGAGTATCTGAGCGCAATTGCTCCTGCAACACCCTACTCAGAATTTGAACATGAATTCCAGGAGATTGGTTGGGAGAGTGACACTGCTGAGCGTGTCCTCGAGATGATTCAGCTTCTATTGGATCTTCTTGAGGCACCTGACCCTTGCACACTTGAGACATTCCTCGGAAGAATCCCTATGGTCTTTAATGTTGTTATCCTTTCTCCCCATGGTTACTTTGCCCAAGATGATGTCTTGGGATATCCTGATACTGGTGGACAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGAATGAGATGCTCAATCGCATCAAGAAACAAGGCTTGGATATCACCCCTCGTATTCTCATTATCACCCGTCTTCTCCCTGATGCAGTTGGAACTACTTGTGGCCAACGTCTTGAGAAGGTATTTGGTACTGAGCATTGTCACATTCTCCGAGTTCCCTTTAGAACAGAGAAGGGAATTGTTCGCCAATGGATCTCAAGATTCGAAGTTTGGCCATACCTAGAGACTTACACCGAGGATGTTGCCAATGAACTTGCCAAAGAGTTGCAAGGCAAGCCAGATCTGATTGTTGGAAACTACAGTGATGGAAACATTGTTGCTTCTTTGTTGGCACATAAATTAGGCGTAACTCAGTGTACCATTGCTCATGCACTTGAGAAGACTAAATACCCAGAGTCTGACATTTACTGGAAAAAATTTGAAGACAAATATCACTTCTCATGCCAATTTACTGCTGATCTTTTTGCAATGAACCACACAGACTTTATTATCACCAGTACCTTCCAAGAGATTGCTGGAAGCAAGGATACTGTTGGACAGTATGAGAGTCACACTGCCTTCACCCTTCCAGGACTTTACCGTGTGGTTCATGGTATTGATGTCTTCGATCCAAAGTTCAACATTGTCTCTCCTGGAGCTGATATGAGCATTTACTTCCCATACACTGAAACTGAGCGTAGGTTGACATCATTCCACCCTGAGATTGAAGAGCTTCTTTACAGCTCAGTGGAGAATGAGGAGCACATATGTGTCTTGAAGGACCGCAACAAGCCGATTATCTTCACAATGGCAAGGTTGGACCGTGTGAAGAACATTAGCGGACTTGTTGAGTGGTATGGCAAGAATGCCCGACTTAGAGAGTTGGTAAACCTTGTTGTTGTTGCTGGAGATAGGAGGAAGGAGTCCAAGGACTTGGAAGAGAAAGCTGAGATGAAGAAGATGTATGGCCTAATTGAGACCTACAAGTTGAATGGTCAATTCAGATGGATTTCCTCTCAGATGAACCGAGTTAGGAATGGGGAACTCTACCGTGTCATTTGTGACACAAAGGGTGCTTTTGTGCAGCCTGCTATTTATGAAGCATTTGGTTTAACTGTTGTTGAGGCCATGACTTGTGGGTTGCCAACATTTGCCACTTGCAATGGTGGTCCTGCTGAGATCATTGTGAATGGAAAATCTGGTTACCACATTGACCCTTACCATGGTGACCGTGCTGCTGAGATCATTGTTGATTTCTTTGAGAAGAGCAAGGCAGACCCATCACACTGGGACAAAATCTCACACGGTGGTCTCAAACGTATCCATGAGAAGTACACATGGCAAATTTACTCTGACAGGCTTCTGACTCTCACTGGTGTCTATGGCTTTTGGAAGCATGTGACCAACCTTGACCGCCGTGAGAGCAAACGTTACCTTGAGATGTTCTATGCACTCAAATACCGCAAATTGGCTGAGTCTGTGCCCCTTGCTGTTGAAGAGTAA 2508 0.447 MLCFSSPVWVFNTATPPFILKDLSFSAQSLCSMANDHLTRSHSFRERLDETLTGHRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEVNRQKLINGAFGEVLRSTQEAIVLPPFVALAVRPRPGVWGYLRVDVHGLVVDELRPAEYLKFKEELVEGSANGNFVLELDFEPFNASFPRPTLNKSIGNGVEFLNRHLSAKLFHGKESMQPLLEFLRLHSHKGKTMMLNDRIQNLNSLQHVLRKAEEYLSAIAPATPYSEFEHEFQEIGWESDTAERVLEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDDVLGYPDTGGQVVYILDQVRALENEMLNRIKKQGLDITPRILIITRLLPDAVGTTCGQRLEKVFGTEHCHILRVPFRTEKGIVRQWISRFEVWPYLETYTEDVANELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTETERRLTSFHPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNISGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAIYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVNGKSGYHIDPYHGDRAAEIIVDFFEKSKADPSHWDKISHGGLKRIHEKYTWQIYSDRLLTLTGVYGFWKHVTNLDRRESKRYLEMFYALKYRKLAESVPLAVEE* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01889 835 Gene3D Glycogen Phosphorylase B; 309 825 - -
Rops11g01889 835 Pfam Sucrose synthase 40 582 IPR000368 GO:0005985|GO:0016157
Rops11g01889 835 FunFam Sucrose synthase 309 576 - -
Rops11g01889 835 NCBIfam sucrose synthase 56 831 IPR012820 GO:0005985|GO:0016157
Rops11g01889 835 Gene3D - 57 177 - -
Rops11g01889 835 FunFam Sucrose synthase 178 304 - -
Rops11g01889 835 FunFam Sucrose synthase 43 177 - -
Rops11g01889 835 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 324 792 - -
Rops11g01889 835 Gene3D Glycogen Phosphorylase B; 556 782 - -
Rops11g01889 835 PANTHER - 39 833 IPR012820 GO:0005985|GO:0016157
Rops11g01889 835 Gene3D - 178 304 - -
Rops11g01889 835 Pfam Glycosyl transferases group 1 593 763 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01889 Rops-Chr11 30568460 30573863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01889 33 835 Glycosyltransferase AT3G43190 83.540 0.0 1412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01889 K00695 - gmx:100819730 1498.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01889 11 30568460 30573863 Rops11g01889 11 30568460 30573863 ECH
Rops2g05096 2 91374044 91379200 Rops11g01889 11 30568460 30573863 PCT