Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01886 ATGAGAACGTCGTCGTTTGGAAGGTGCAGCAACGGTGAACTCGACTTGCCGGAAAATTTCGGAACCTCATCGCCGGCGACGGGAGGACATGCCTACGGTGCCATGTTGCCGATGTTTCTCAACGACCTCCGGAGCAACCATCACCAGGAGTTAGTTGAAATCACATTGGAGCTCGAAGATGACGCCGTTGTGCTATGCAACGTTGCGCCGGCGACCGTCGCTGCATCTTCTGCTCCCAACGCTTCGCCGTCGTCGAGTCCAATCGCCGGAAACGAAGGCGGTGGCGGCGGTGCCTTCGCGAGGAGCCTATCGAAGAGCCTGTCAGTTACATCGAGGATTAGGAGGAAGTTCCCGTGGCTGCGGTCAATGTCGTCGGCGTCATCGGAGGGCGTTGCCGCCGTGGAAGATCAGGTGGTGACGGCAAGAAATGCTCGGAGAATGAGAGCGAAGCTTGAACGGACGAGATCGAGTGCGCAGAGAGCTTTGAAAGGTTTGAGATTCATCAGCAAATCTGGGGAAGCTAGTGAGGAGTTATGGAGAAAGGTTGAAGAGAGGTTCAGCTTGCTAGCTAAGGATGGTTTGCTCGCTAGAGAAGACTTCGGTGAATGCATTGGGATGGAGGATTCGAAGGAATTTGCGGTGGGTATATTTGATGCATTAGCTCGAAGAAAGGAAAGAAGAGTGAGCAAGATAACCAAAGAAGAGCTGCGTCACTTCTGGTTGCAAATTTCAGACCAGAGCTTTGATGCTCGCCTTCAGATTTTCTTTAACATGGCAGACAGTAATGAAGATGGAAGAATTACCAGGGAGGAAGTGCAAGAGCTCATAATGCTCAGTGCTTCTGCAAACAAGCTATCGAAGCTGAAAGAACAAGCTGAAGGATACGCTTCGTTAATAATGGAAGAGTTGGATCCGGAAAACCTGGGTTATATCGAGTTGTGGCAACTAGAAATGTTGTTGCTACAGAAAGATAACTACATGAACTACAGCAGACAACTCAGCAACACAAGTGTAGGCTGGAGTCAAAACACGAGTGGTTTGAGGCCCAAAAATGAGATCCAAAGATTCCTCAGGACACTCCACTGTCTTGCATTAGAATATTGGAGGAGGGGCTGGATATTGTTATTATGGTTGGTTACTATTGCTTGCCTTTTTACCTGGAAATTTTACCAGTATAGAAACAGATCAAGTTTCCAAGTCATGGGTTACTGCTTACCAGTCGCCAAAGGTGCTGCAGAGACACTGAAGCTCAACATGGCTCTCATCCTTTTACCAGTTTGTCGAAACACATTGACATGGCTTCGCTCCACAAGAGCCAGGAAATTTGTCCCCTTCGATGACAACATTAATTTCCACAAGATTATTGCATTTGCCATAGCTGTTGGAGTAGTTGTTCATGCGGGCAATCATCTGGCATGCGATTTTCCCCTTCTCATAAATTCATCTCCAGAAAAATTTTCACTTATATCTTCAGATTTCGACAACAAAAAGCCCACATACAAAACACTTCTGACTGGTGTTGAAGGCGTAACTGGAATCTCAATGGTTACTTTGATGGCTATCTCTTTCACTTTAGCAACTCACCATTTCCGGAGAAATGCAGTGAGGCTTCCTCCACCTTTCAACAGATTGACTGGCTTTAATGCATTCTGGTACTCACACCACCTTCTTGGTCTTGTCTATGTTCTGCTCTTCATCCATGGAATATACTTGAATTTAACCCATCGGTGGTACCAGAAAACGACATGGATGTATATCTCTGTTCCACTGTTGCTGTACATAGCAGAGCGTACTCTAAGAACTCGTAGATCAAAGCATTATGCAGTCAAAATTCAGAAGGTTTCGGTGCTACCAGGAAATGTCTTTAGCTTAATCATGTCCAAGCCTAATGGATTTAAGTACAAAAGTGGACAGTACATATTTTTGCAATGCCCAAGAATCTCTCCATTTGAGTGGCACCCATTCTCCATTACCTCAGCACCAGGAGATGAGTACCTAAGTGTTCACATTCGCACAGTTGGAGACTGGACGCAGGAACTTAAGCTACTTCTCACCGAAGATGACAAGCTGCCTTCACCTAGTTGTCGTGCAACATTCCGTGAACTAGTGCAAATGGATCAAAGAGGAATACCGAGACTGCTCGTTGATGGCCCTTATGGAGCTCCAGCACAAGATTACCAGAATTTTGATGTACTGCTCCTCATTGGATTAGGAATTGGAGCAACTCCTTTCATTAGTATTCTCAGAGATCTTCTCCATGACACGAGAACAATTGATGAACTAATGGAGTCAAACACAGAAACAACCAGATCAGATGAGAGCTTCAATAGTTTTACATCTTCAAATTTGACACCAGGAGGCGGAAATAAGAGATCACAAAGGACTACAAATGCTTATTTCTACTGGGTTACCAGGGAACCTGGATCTTTTGAATGGTTTAAAGGAGTAATGGATGAAGTTGCAGAAATGGACCACAAAGGTCAAATTGAACTTCACAACTATCTTACAAGTGTCTATGAAGAGGGGGATGCGAGATCAACCCTAATCACCATGATTCAAGCACTGAACCATGCCAAACATGGTGTTGACATCCTATCAGGCACTCGAGTGAGGACACACTTTGCTAGGCCTAATTGGAGAGAAGTTTTCACCAAGATAGCATCTAAACATCCGTATTCTACAGTAGGTGTGTTCTATTGCGGGATGCCAGTGTTGGCAAAGGAGCTAAAGAAACTATCGCTTGAGCTGAGCCACAAGACAACTACTCGCTTCGACTTTCATAAGGAGTACTTCTGA 2796 0.4531 MRTSSFGRCSNGELDLPENFGTSSPATGGHAYGAMLPMFLNDLRSNHHQELVEITLELEDDAVVLCNVAPATVAASSAPNASPSSSPIAGNEGGGGGAFARSLSKSLSVTSRIRRKFPWLRSMSSASSEGVAAVEDQVVTARNARRMRAKLERTRSSAQRALKGLRFISKSGEASEELWRKVEERFSLLAKDGLLAREDFGECIGMEDSKEFAVGIFDALARRKERRVSKITKEELRHFWLQISDQSFDARLQIFFNMADSNEDGRITREEVQELIMLSASANKLSKLKEQAEGYASLIMEELDPENLGYIELWQLEMLLLQKDNYMNYSRQLSNTSVGWSQNTSGLRPKNEIQRFLRTLHCLALEYWRRGWILLLWLVTIACLFTWKFYQYRNRSSFQVMGYCLPVAKGAAETLKLNMALILLPVCRNTLTWLRSTRARKFVPFDDNINFHKIIAFAIAVGVVVHAGNHLACDFPLLINSSPEKFSLISSDFDNKKPTYKTLLTGVEGVTGISMVTLMAISFTLATHHFRRNAVRLPPPFNRLTGFNAFWYSHHLLGLVYVLLFIHGIYLNLTHRWYQKTTWMYISVPLLLYIAERTLRTRRSKHYAVKIQKVSVLPGNVFSLIMSKPNGFKYKSGQYIFLQCPRISPFEWHPFSITSAPGDEYLSVHIRTVGDWTQELKLLLTEDDKLPSPSCRATFRELVQMDQRGIPRLLVDGPYGAPAQDYQNFDVLLLIGLGIGATPFISILRDLLHDTRTIDELMESNTETTRSDESFNSFTSSNLTPGGGNKRSQRTTNAYFYWVTREPGSFEWFKGVMDEVAEMDHKGQIELHNYLTSVYEEGDARSTLITMIQALNHAKHGVDILSGTRVRTHFARPNWREVFTKIASKHPYSTVGVFYCGMPVLAKELKKLSLELSHKTTTRFDFHKEYF* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01886 931 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 604 725 IPR017927 GO:0016491
Rops11g01886 931 MobiDBLite consensus disorder prediction 768 791 - -
Rops11g01886 931 Gene3D - 151 268 - -
Rops11g01886 931 PRINTS Cytochrome B-245 heavy chain signature 547 567 IPR000778 GO:0016020|GO:0016491
Rops11g01886 931 PRINTS Cytochrome B-245 heavy chain signature 455 473 IPR000778 GO:0016020|GO:0016491
Rops11g01886 931 PRINTS Cytochrome B-245 heavy chain signature 734 751 IPR000778 GO:0016020|GO:0016491
Rops11g01886 931 Coils Coil 141 161 - -
Rops11g01886 931 MobiDBLite consensus disorder prediction 75 95 - -
Rops11g01886 931 PANTHER NADPH OXIDASE 212 931 - -
Rops11g01886 931 FunFam Respiratory burst oxidase protein E 720 931 - -
Rops11g01886 931 Pfam FAD-binding domain 607 722 IPR013112 GO:0016491
Rops11g01886 931 FunFam Respiratory burst oxidase homolog A 595 687 - -
Rops11g01886 931 Gene3D - 720 931 IPR039261 -
Rops11g01886 931 SUPERFAMILY Riboflavin synthase domain-like 606 722 IPR017938 -
Rops11g01886 931 MobiDBLite consensus disorder prediction 75 89 - -
Rops11g01886 931 ProSitePatterns EF-hand calcium-binding domain. 260 272 IPR018247 -
Rops11g01886 931 FunFam Respiratory burst oxidase homolog A 151 268 - -
Rops11g01886 931 Pfam Ferric reductase NAD binding domain 729 913 IPR013121 GO:0016491
Rops11g01886 931 SUPERFAMILY EF-hand 167 333 IPR011992 -
Rops11g01886 931 MobiDBLite consensus disorder prediction 1 22 - -
Rops11g01886 931 Pfam Ferric reductase like transmembrane component 410 564 IPR013130 -
Rops11g01886 931 CDD EFh 230 277 IPR002048 GO:0005509
Rops11g01886 931 CDD NOX_Duox_like_FAD_NADP 613 873 - -
Rops11g01886 931 SFLD NADPH oxidase subgroup (NOX) 134 931 - -
Rops11g01886 931 Pfam Respiratory burst NADPH oxidase 150 250 IPR013623 GO:0004601|GO:0050664
Rops11g01886 931 Gene3D Translation factors 593 692 - -
Rops11g01886 931 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 728 931 IPR039261 -
Rops11g01886 931 ProSiteProfiles EF-hand calcium-binding domain profile. 247 282 IPR002048 GO:0005509
Rops11g01886 931 MobiDBLite consensus disorder prediction 763 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01886 Rops-Chr11 30474104 30483591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01886 23 931 Miscellaneous Gene Families AT1G19230 62.766 0.0 1178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01886 K13447 - gmx:100805697 1562.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01886 11 30474104 30483591 Rops11g01886 11 30474104 30483591 ECH