Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01851 ATGGGAATTGATAGAAAGGATGTCAGAATTGTGTGCCACTTCAATATTCCGAAGTCAATGGAAGCATTCTATCAAGAGTCAGGCAGAGCAGGCCGTGATCAATTGCCTTCGACAAGTCTTTTGTACTATGGGATAGATGATCGCAAAAGAATGGAATTTATATTGAGCAACTCAGGGAGCAAGAAGTTACAATCATCAAGTTCACAAGAAGAATCCTCCAGAATGTCCCTGACTGCTTTCAACCAGATGGTTGAATATTGTGAAGGATCTGGATGTCGTAGGAAAAGGATTCTCGAGAGTTTTGGGGAGCAGGTAACCGCATCACTATGTGGAAAAACATGTGATGCCTGTAGACATCCAAACATAGTTGCCAGATACTTGGAGGATCTCACAACTGCCTGTGCTTTACGTCAGAAAAATGGTTCTTCTCGAGTTTTTATCTCCAGTTCCACTGACACAATTGCTGGAGAAGAGTTATCTGAATTCTGGAATCGGGATGAGGAAGCAAGTGGATCAGAGGAAGATATATCTGACTCAGATGATGGTCATGAGGTTGTCAACCACCTAACCCGGTCAAAGCGTCAATCCAGATTAGGAATAAATGAAAAGCTTACTTTGTTACAACGGGCAGAAGAAAATTTCTATCGTAATGAGAACACTGATAAACAGAGGAACAAAGTTGACAAGAATGCTATTTCTGATACAATGCGAGGAACAAGCAGGCAAAGATTACAAAATGCTCTAAAACAGGCTCAGCAAAGGCTTGACAACTTCAAGATTGAAATGGAAACCTTGGCATCTTTTCTTGAAGATGAATGCTACAATAAATATGGCAAGGCTGGCAAATCATTCTATTACTCACAAGTGGCAAGTACTGTAAGGTGGCTGACAACTACAGGTTCTGGCGATCTGATGAACCGATTTTCTGCAATCAATGCTTCCACATCAGCGAATGTCTTGTCTGAAGCTGAACATGCCCTCACCCCGCCACCTGCTTTAGATCCTTGTGCAAAAGAAGATACTAGCAATGAGCTCTCAGGCAACGCTAGATCAGAAACTTTCACATGTGCTGTGGCAATGGAAGGTTCTTTTGATACAAAGTTGCCACAAATACCATCCTTCTCTGAATTCGTAAATAGTAGGAAAGCAAAAGGGGACCAACAAAATGACACAAAAAAGCATTCATCAAGAGTAGAAAAGAAGATGAGGATACAGTAG 1218 0.4146 MGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGIDDRKRMEFILSNSGSKKLQSSSSQEESSRMSLTAFNQMVEYCEGSGCRRKRILESFGEQVTASLCGKTCDACRHPNIVARYLEDLTTACALRQKNGSSRVFISSSTDTIAGEELSEFWNRDEEASGSEEDISDSDDGHEVVNHLTRSKRQSRLGINEKLTLLQRAEENFYRNENTDKQRNKVDKNAISDTMRGTSRQRLQNALKQAQQRLDNFKIEMETLASFLEDECYNKYGKAGKSFYYSQVASTVRWLTTTGSGDLMNRFSAINASTSANVLSEAEHALTPPPALDPCAKEDTSNELSGNARSETFTCAVAMEGSFDTKLPQIPSFSEFVNSRKAKGDQQNDTKKHSSRVEKKMRIQ* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01851 405 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 74 IPR001650 -
Rops11g01851 405 PANTHER DNA HELICASE RECQ FAMILY MEMBER 1 285 - -
Rops11g01851 405 Coils Coil 241 268 - -
Rops11g01851 405 MobiDBLite consensus disorder prediction 375 405 - -
Rops11g01851 405 MobiDBLite consensus disorder prediction 164 183 - -
Rops11g01851 405 MobiDBLite consensus disorder prediction 383 405 - -
Rops11g01851 405 Gene3D - 1 136 IPR027417 -
Rops11g01851 405 Pfam RecQ zinc-binding 47 118 IPR032284 -
Rops11g01851 405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 137 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01851 Rops-Chr11 29881140 29889661 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01851 K10901 - gmx:100819601 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01851 11 29881140 29889661 Rops11g01851 11 29881140 29889661 ECH