Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01844 ATGGCGTATGACAATTTCCTTCTGTTGTTGTTCTCCAATGAGAGCTTTGCTACAATTTATCATTTTATATCACATCGACCGGGAGTGGGAGCATCATTCTTGAATCATCCTCAATCTTCTCTATACATCAGTGTCAGTATCGGAGTTTGCAGGGAAATGGGTTCCGAAGACAAAAACTTGGACTTTTTGAAAGAGATCGGTTTGGGTTCCACCAACGTTGGTGGTTACATTAATGGTCAATGGAAAGCCACTGGTTCATCTGTGACTTCTGTTAATCCTTCTACCAATCAGACTATTGCTACAGTGACTGAAGCAACTGTGCAAGATTATGAGGAGGGATTGCAAGCTTGCAGTGAAGCAGCTAAGATATGGATGACTATTCCTGCACCGAAAAGAGGTGAGATTGTAAGACAGATTGGTGAAGCATTAAGGGCCAAATTGGATCATCTGGGTAGGTTGGTGTCTCTTGAGATGGGAAAAATTGTTCCAGAAGGAATTGGGGAGGTTCAGGAAATTATCGATATGTGTGATTATGCTGTTGGGCTAAGCCGACAATTGAATGGATTGATTATACCTTCAGAACGTCCAGATCATATGATGTTGGAGGTATGGAATCCACTAGGAATAGTTGGTGTAATCACTGCTTTCAACTTTCCATGTGCTGTTCTAGGATGGAATGCTTGCATTGCATTAGTCTGTGGTAACTGTGTTGTGTGGAAGGGCGCTCCAACTACTCCGTTGATAACTATTGCTGTGACAAAGCTAATAGCTGAAGTTCTTGAGAGGAACAAATTACCGGGAGCAATATTCACCTCTTTCTGTGGAGGTGCTGATATTGGTCAGGCAATAGCGAAAGACACACGCATTCCCCTGGTTTCATTTACTGGAAGTTCAAAGGTGGGCTTGATGGTCCAGCAAACAGTTAACGAAAGATTTGGCAAATGCTTGCTTGAGTTAAGTGGTAACAATGCAATAATAGTCATGGATGATGCAGACGTCAAACTGGCTGTACGCTCTATTTTGTTTGCAGCTGTGGGTACTGCTGGTCAGCGGTGTACAACCTGCCGTAGACTGTTTCTGCATGACAGTATATACACAAATGTACTAGATCAACTTATTGGAGTCTACAAACAAGTCAAAATTGGAAATCCCCTGGAGAAAGGGACTCTAGTTGGGCCTTTGCATACTCGTTCTTCAGTGGAAAACTTTGAGAAGGGTATCTCAGTCATAAAATCTCAGGCACGGAAGATCCTAACCGGGGGATCTGTATTAGAGTCAGAAGGAAATTTTGTACAGCCAACAATTGTTGAGATTTCTCCAGATGCTCCTGTAGTTAAAGAAGAGTTGTTTGGTCCAGTTCTCTATGCTATGAAATTTAAGACTCTGGAAGAAGCAATTGCCTTGAACAATTCTGTACCTCAAGGATTGAGTAGTTCAATCTTTACGAAAAGACCTGAAGCTATATTCAAGTGGTTAGGGCCACGAGGTAGTGATTGTGGTATAGTGAATGTGAACATACCAACAAATGGAGCTGAGATCGGAGGTGCCTTTGGTGGAGAAAAGGCAACTGGTGGTGGTCGCGAAGCAGGAAGTGACTCCTGGAAACAATACATGCGACGTTCTACATGTACCATCAATTATGGAAGTGAACTACCATTAGCTCAAGGAATAAACTTTGGCTAG 1683 0.4254 MAYDNFLLLLFSNESFATIYHFISHRPGVGASFLNHPQSSLYISVSIGVCREMGSEDKNLDFLKEIGLGSTNVGGYINGQWKATGSSVTSVNPSTNQTIATVTEATVQDYEEGLQACSEAAKIWMTIPAPKRGEIVRQIGEALRAKLDHLGRLVSLEMGKIVPEGIGEVQEIIDMCDYAVGLSRQLNGLIIPSERPDHMMLEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAVTKLIAEVLERNKLPGAIFTSFCGGADIGQAIAKDTRIPLVSFTGSSKVGLMVQQTVNERFGKCLLELSGNNAIIVMDDADVKLAVRSILFAAVGTAGQRCTTCRRLFLHDSIYTNVLDQLIGVYKQVKIGNPLEKGTLVGPLHTRSSVENFEKGISVIKSQARKILTGGSVLESEGNFVQPTIVEISPDAPVVKEELFGPVLYAMKFKTLEEAIALNNSVPQGLSSSIFTKRPEAIFKWLGPRGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01844 560 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 88 537 IPR016162 GO:0016491
Rops11g01844 560 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 56 560 IPR044638 GO:0004029
Rops11g01844 560 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 321 512 IPR016163 GO:0016620
Rops11g01844 560 CDD ALDH_F7_AASADH 75 548 - -
Rops11g01844 560 FunFam Alpha-aminoadipic semialdehyde dehydrogenase 321 512 - -
Rops11g01844 560 Pfam Aldehyde dehydrogenase family 85 540 IPR015590 GO:0016491
Rops11g01844 560 SUPERFAMILY ALDH-like 71 549 IPR016161 GO:0016491
Rops11g01844 560 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 317 324 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01844 Rops-Chr11 29770106 29779616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01844 53 560 Acyl Lipid Metabolism Gene Families AT1G54100 79.331 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01844 K14085 - gmx:100811186 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01844 11 29770106 29779616 Rops11g01844 11 29770106 29779616 ECH