Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01834 ATGGCCGGCACCAAGAGAATCGAAACCTACGAAGAGTTCTCCAAAGTTCACGCACTGTTACTCGTGGCGTCGGGGTTGCCGGAGACACTGCACCGCCGCCTCTTCCAGAAGCTCTCCGCCGAGACCTTCGACGGCGGCGAACACTTCCAGATTGAGCCATGTGAGGACGGCCGCCAGAGGCGCCTCGTTCTCACCTCAGATTCCATGAAAAAGGACTCCGATGTCTTCCTCATCGACCATGCTTGGACTTTCAGACTCCCCGACGCTTACAAACAGCTGCATGAGGTTCCGGGATTGGCTGAGAGGATGGGTTCATTGATGTGTGTGGATATTGATATGAATTTGGATGATGAAACTGAGGAAAATGGTGTTTCGAGTGAGGAACGTGATGTTGTGGAAATATTGGAGAGTAATGTTCGAGAAGCAAAAGAGAAAGGAGATGGCACGTTAAGGTGGCTGGAGCTTGATGGACTTGGCATTGATGATGATATGCTTCTTTCTCTTGACTTATCTACTAGATTTCCGGATTTGGTAGGACTTAGCCTATTTGGAAACAAGCTCAATAGAGCTGAAGTGATTGTTCAGGAAGTTATCAAATTTAAACATCTTAAAGGACTCTGGGTGAATAACAATCCGGTTCTTAAAAATGGTGATGTTGACCTTGCAGGTGTTGTTCTTAAGGAGTTACCAGAACTGGAGATTTATAATCCAACTTTCACGAGCAATTTCGGGGAGTGGGCCTTGGGCTTTTGTGCAGGGATTTATGGAGAGGATAACCCGGCAAATGCTGATCAGACTGACTGTCCACTGCTGAGTGTGTCTAATCTTGACCTTTCAAATAGAAACATTCACAATTTAATCAACAAGGCATTTTCACCCATTTGTTTGCCATCTCTTTCATACTTGAACATTCATGGAAATCCATTGGAGCAAAACTCTGTTGGTGACTTGTTAAATCTGCTGAGGAGATTTCCTTGCTTATGCTCATTGGAGGTGGATATTCCTGGTCCACTTGGAGGAAGTGCCATTGAAATTCTGGAATTTCTTCCAAACATTTCTGAACTAAATGGTATCAGTGCATCCAAAATATTGGAAACTAGAAAGCATGTTATTGATTCAGTGCTTCTTCCTCGTCTTCCTGAATGGACTCCTGATGAGCCTCTTGCTGACCGTATTATAAGTGCAATGTGGCAATATCTAATGACGTATAGACTTGCAGATGAAGAAAAGTTAGATGAGACGTCTGTATGGTATGTGATGGATGAACTAGGTTCTGCTTTGCGGCACAGTGATGAGCCAAATTTCCGAGTGGCGCCTTTTCTTTTCATGCCAGAGGGTAATCTGGCATCAGCTGTGAGCTTTTCTATTCTTTGGTCAACTCAGAATGTTCGGAAAGGTGATGAATGCACTCGTGATTTTCTTCTTGGTATTGGGGAGGATAAACAACGCTCTGCCAGACTTACTGCCTGGTTCCACACGCCAGAGAACTATTTTATCCAAGAGTATGAGAAGCACAATCAAAAATTGCAATCCACAAGTTCAATACCACCAACTATACAGTCTTCTGAAACTAGAAGTATTCGCCAACCTGATGGCCGTCCTTTACGTGTTTACACTGATATACCTCATGTGGAGGAAAACTTGACACATCCAGAGTTCGCGATCACAAAGGAACCAAAAGATGCAGATATAATATGGACAAGTGTGCAGGTAGATGAAGATATGAAGAAGGCCACAGGAATAACAGATCAGCAATACATTAATCAATTCCCTTTTGAGGCTTGTCTTGTCATGAAACATCATTTAGCAGAGACAATTCAGAAGGCACATGGATCTCCTCGATGGTTGCAGCCTACTTATAATCTTGAAACACATTTATCTCAACTTATTGGAGACTATTATGTACGCAAAAGAGAAGGACTAGACAATCTTTGGATCTTAAAACCCTGGAACATGGCCCGAACTATTGATACTACTGTAACTGATAATTTACCTGCAATAATCCGACTCATGGAAACTGGTCCAAAAATTTGCCAGAAGTATATTGAACACCCTGCTTTGTTCCAGGGGAAAAAGTTTGATCTCCGGTACATAGTATTGGTTCGGAGCATGCACCCTTTGGAGATATTCTTGTCAGATTGTTTCTGGGTCAGGATAGCCAACAACCAATATTCTTTGGATAGAAGTAGTTTTTTCGAGTATGAAACTCACTTCACTGTTATGAATTATCGTGGAAGAATAAATAACAAGAATATTAAGGATTTTGTGAGGGAATTTGAGGAAGAACATCAAGTCAAATGGTTGGATATACATGAAAGAGTAAGGAATATGATTCGATCAGTGTTTGAGGCAGCTGCTGTTGTACATCCAGAGATGCATAGTCCAACATCAAGGGCAATGTATGGTGTAGATGTCATGTTGGACAACACTTTCCAACCTAAAATACTAGAGGTGACTTACTGCCCTGATTGTACAAGAGCTTGCAAATATGACATGGATATTGTGGTTGGAGAGGGAGGTATTGCCAAAGGTTGTGATTTCTTCAACAACGTGTTCAGGTGTCTCTTCTTGAATGAAAATTCGCAGGTTAGCCCATTGTAA 2601 0.4229 MAGTKRIETYEEFSKVHALLLVASGLPETLHRRLFQKLSAETFDGGEHFQIEPCEDGRQRRLVLTSDSMKKDSDVFLIDHAWTFRLPDAYKQLHEVPGLAERMGSLMCVDIDMNLDDETEENGVSSEERDVVEILESNVREAKEKGDGTLRWLELDGLGIDDDMLLSLDLSTRFPDLVGLSLFGNKLNRAEVIVQEVIKFKHLKGLWVNNNPVLKNGDVDLAGVVLKELPELEIYNPTFTSNFGEWALGFCAGIYGEDNPANADQTDCPLLSVSNLDLSNRNIHNLINKAFSPICLPSLSYLNIHGNPLEQNSVGDLLNLLRRFPCLCSLEVDIPGPLGGSAIEILEFLPNISELNGISASKILETRKHVIDSVLLPRLPEWTPDEPLADRIISAMWQYLMTYRLADEEKLDETSVWYVMDELGSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWSTQNVRKGDECTRDFLLGIGEDKQRSARLTAWFHTPENYFIQEYEKHNQKLQSTSSIPPTIQSSETRSIRQPDGRPLRVYTDIPHVEENLTHPEFAITKEPKDADIIWTSVQVDEDMKKATGITDQQYINQFPFEACLVMKHHLAETIQKAHGSPRWLQPTYNLETHLSQLIGDYYVRKREGLDNLWILKPWNMARTIDTTVTDNLPAIIRLMETGPKICQKYIEHPALFQGKKFDLRYIVLVRSMHPLEIFLSDCFWVRIANNQYSLDRSSFFEYETHFTVMNYRGRINNKNIKDFVREFEEEHQVKWLDIHERVRNMIRSVFEAAAVVHPEMHSPTSRAMYGVDVMLDNTFQPKILEVTYCPDCTRACKYDMDIVVGEGGIAKGCDFFNNVFRCLFLNENSQVSPL* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01834 866 Gene3D Ribonuclease Inhibitor 133 374 IPR032675 -
Rops11g01834 866 Coils Coil 125 145 - -
Rops11g01834 866 FunFam Tubulin--tyrosine ligase-like protein 12 657 845 - -
Rops11g01834 866 Gene3D - 660 839 - -
Rops11g01834 866 SUPERFAMILY RNI-like 150 333 - -
Rops11g01834 866 MobiDBLite consensus disorder prediction 509 528 - -
Rops11g01834 866 ProSiteProfiles TTL domain profile. 530 858 IPR004344 GO:0036211
Rops11g01834 866 MobiDBLite consensus disorder prediction 509 534 - -
Rops11g01834 866 Pfam Tubulin-tyrosine ligase family 584 834 IPR004344 GO:0036211
Rops11g01834 866 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 3 865 IPR027749 -
Rops11g01834 866 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 643 823 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01834 K16609 - gmx:100809212 1515.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01834 11 29561566 29568155 Rops11g01834 11 29561566 29568155 ECH