Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01831 ATGGGTCCCACCAAAACCACCCCAAAACCCTCTAAACTCAACGACATCCACCCCCTCACTCCTGATCAAACCCACGAACCTTCTTCCCTTTCCCTCTCTCCGCAGCTTCGGAGACGGAGCCTCCGCCTCGCCTCCGTTCCCAACTCCGAACCTCCCACAACTCCCGATCCCACTGTTAGGGTTTCCATCATGAAGGGAAAGAAGAAACCAAATAGTTCAGAATGCGAGGGAGAAGAAGAAAGGGGAAAGGGTTTTCTGAACTTACGCTCAGGAAAAAAGGTTCTCAAACGAGGAATCACCGATTCAGAAAACAGTAGGAAAAGAAGAAAAGAAGAAAAAGAAGAGAAGAACGATGATTCGTTAGAGAAGAGTCATGTTAACGATGAAGGAGGTTCGAGTAGAAGGAGAATACTAAGCAGAGAAGAGAAAGGGAAAGCACCAGTGGTTGTTGATGATGATGACAAATTAGGCGAAGAATCCAAAATGGAGAACTCAGTTGTTAACCATTCAGTTGATAACAAAGTCTTGAAAGATCGAGAACAATCTAGAGACACCAACACAAGAGACAACGGTGGTTCTAAGAGGAACGGTTACATGGAACGGTTCCGTGACATAGCGAGGGAAAATGCATCTCGGTTCGCTCATTTTGCACCGGATGAAAACAGTTACCTGCCATCATCTCCGGAGGAACCCGAAAAGGAGAACGAAATTGAAGATTGGCCTGGTCCATTCTCAACCGCTATGAAAATCATCAGAGACAGAGAAACAAAAGGCACTCAAACAGGTTCTGCGTCTTCGCAAACAAGCTTAGTCGAGTCTATTGCGTGGGTTCCTAAAACGAATCAAAGGAATGTTGGTGAAACAAGGTTTTCGGTGCCGTCATTGCAAGAGCTGTGTCTTAAAATTTTGGCTCAAAATGTTGATGCCATTGTTTCGCTAGAGAGTGTTCCTGATGCTCTGAGGCACAGGCTGAGTCAGTTGATGTGTGACTCGAGGAGAATTAACAACCACTTTTTTGAACTTCTTGTTGGTGGAACTCCGACGGAGATTCGGTTAAGAGATTGCTCTTGGTTGACAGAGGAACAATTTACCAAGTGTTTTCAAACGTGTGACACTTCCAATTTGGCGGTACTGCAACTTGACCAGAGTGGCCGCTGTTTGCCAGATTATGTAGTTGTTGCAACTTTGGCACAGTCACCAAGGCAGTTACCTAGATTAACTAGCCTGTCCCTCAGTGGCGCATGCCGTCTTTCAGATGGGGGATTGCGTGCGCTTGTTTCTTCTGCTCCAGCGCTTAGATCGATTAATCTCAGCCAGTGCTCCCTTCTCACATCTGCTAGTGTTTATATTTTGGCTGAATCATTAAAATCTCTTCTGAAAGAGTTGTACCTCGATGATTGCCAAGGCATTGATGCAGCACTAATTGTGCCAGCATTGGTGGAGCTTGAACATTTAGAAGTGTTGTCAGTGGCTGGTATACAAACTGTTTGTGATAAATTTGTCAAGGATTACATTGTTGAACGTGGTCACAACATGAAAGAGCTTGTTTTGAAGGACTGTATAAACTTGACTGACGCATCAATCAAAGTCATTGCAGAACACTGTCCTGGTTTATGTGTGCTTGATCTTATGAACTTGTGCAAATTGACAGATTTATCCATAGGATATCTCACAAATGGTTGTCGTTCACTTCACACGCTGAAGCTTTGCCGTAATCCATTAAGTGATGAAGCGATTGCTGCATTTGTGGAGACCACTGGAGATTCCTTGAAAGAACTGTCACTTAATAACATTAGAAAGGTTGGTTACCACACAACCTTGTCACTTGCAAGGCATGCAAAAAATTTGCAAAGTTTAGATCTATCTTGGTGCCGAAATTTGGCCGACAATGCATTGGGTTTGATAGTGGATAGCTGCTTGTCGCTGAGGTTACTTAAACTTTTTGGATGCACTCAGGTAACAAATGTTTTTCTGAACGGCCACTCAAACCTGCAGATTCAGATAATTGGTTTGAAGATGTCTCCTGTTTTGCAGCATGTCAAAGTGCCGGATCCTCATCAAGGTGCTTTGAATTATTCATCAGTTGCCGTAGATATGGTATAA 2103 0.4384 MGPTKTTPKPSKLNDIHPLTPDQTHEPSSLSLSPQLRRRSLRLASVPNSEPPTTPDPTVRVSIMKGKKKPNSSECEGEEERGKGFLNLRSGKKVLKRGITDSENSRKRRKEEKEEKNDDSLEKSHVNDEGGSSRRRILSREEKGKAPVVVDDDDKLGEESKMENSVVNHSVDNKVLKDREQSRDTNTRDNGGSKRNGYMERFRDIARENASRFAHFAPDENSYLPSSPEEPEKENEIEDWPGPFSTAMKIIRDRETKGTQTGSASSQTSLVESIAWVPKTNQRNVGETRFSVPSLQELCLKILAQNVDAIVSLESVPDALRHRLSQLMCDSRRINNHFFELLVGGTPTEIRLRDCSWLTEEQFTKCFQTCDTSNLAVLQLDQSGRCLPDYVVVATLAQSPRQLPRLTSLSLSGACRLSDGGLRALVSSAPALRSINLSQCSLLTSASVYILAESLKSLLKELYLDDCQGIDAALIVPALVELEHLEVLSVAGIQTVCDKFVKDYIVERGHNMKELVLKDCINLTDASIKVIAEHCPGLCVLDLMNLCKLTDLSIGYLTNGCRSLHTLKLCRNPLSDEAIAAFVETTGDSLKELSLNNIRKVGYHTTLSLARHAKNLQSLDLSWCRNLADNALGLIVDSCLSLRLLKLFGCTQVTNVFLNGHSNLQIQIIGLKMSPVLQHVKVPDPHQGALNYSSVAVDMV* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01831 700 MobiDBLite consensus disorder prediction 172 197 - -
Rops11g01831 700 MobiDBLite consensus disorder prediction 1 197 - -
Rops11g01831 700 Gene3D Ribonuclease Inhibitor 608 680 IPR032675 -
Rops11g01831 700 Gene3D Ribonuclease Inhibitor 504 607 IPR032675 -
Rops11g01831 700 Gene3D Ribonuclease Inhibitor 296 503 IPR032675 -
Rops11g01831 700 MobiDBLite consensus disorder prediction 67 87 - -
Rops11g01831 700 SUPERFAMILY RNI-like 589 660 - -
Rops11g01831 700 MobiDBLite consensus disorder prediction 218 242 - -
Rops11g01831 700 MobiDBLite consensus disorder prediction 94 162 - -
Rops11g01831 700 PANTHER UNCHARACTERIZED 302 660 - -
Rops11g01831 700 MobiDBLite consensus disorder prediction 1 38 - -
Rops11g01831 700 SMART LRR_CC_2 535 560 IPR006553 -
Rops11g01831 700 SMART LRR_CC_2 509 534 IPR006553 -
Rops11g01831 700 SMART LRR_CC_2 613 638 IPR006553 -
Rops11g01831 700 SMART LRR_CC_2 403 428 IPR006553 -
Rops11g01831 700 SMART LRR_CC_2 429 454 IPR006553 -
Rops11g01831 700 SMART LRR_CC_2 561 585 IPR006553 -
Rops11g01831 700 SMART LRR_CC_2 639 664 IPR006553 -
Rops11g01831 700 FunFam RNI-like superfamily protein 286 503 - -
Rops11g01831 700 FunFam F-box/LRR protein 508 685 - -
Rops11g01831 700 SUPERFAMILY RNI-like 373 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01831 Rops-Chr11 29545720 29550679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01831 K15082 - gmx:100808150 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01831 11 29545720 29550679 Rops11g01831 11 29545720 29550679 ECH
Rops2g05138 2 92046109 92050469 Rops11g01831 11 29545720 29550679 PCT