Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01828 ATGGCTGGAATGACAAAGGAGGAAGAGTCAGTTAGTCCTAGTTGGGGTGCTTCGTTTTTCATGCAGACAACAGAGGATGTGGCTAGGGCTGTCGCTGCTGCTGTGAATTCTCCAAGGCCATCTGTGGTATATTCATCAAAAAACAATCGTGGTGGTAGTCAACTTCAAAGGTTGCAGTATCAAGTTACAAAATTGGTTAAAGGATTTTCTCGTGATCCTGAAGTTAAATACACAAATTACAATCCAGAAACACTGACAAGCCAGAAGCGTCAATGGGCTGCAAACTTTCATTTGCAGTACATGGATCATAGGTCTTGGAAGGAGCCAACACAGCTGTTTGAAAGCATGGTGATTGTTGGACTTCATCCTAATTGTGATATTCAGGCACTGGAAAGGCAATATTTAGTTAGAAAGTCTGAAGGCTCTAGTAAATTGAGAAGTGCACTTGGTTATCAGAATCAATCCCGTGTAGAGCCCAATCTCGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAGCAGCTGCCTCTTAAAGACAAGGATCTTCTTTCTTTCTGCTTCCCTGGAGGCCTGGAGGTTAATGCTGTTGAGAGAACCCCTTCCATGAGTGAATTGAATGAGATTCTTTACGGGCAGGAACACCTTAAACAAAGGGATCTGTCTTTTGTATTTAGGTTACAGGGTGCTGATAATTCGACACTTTATGGATGCTGTGTCTTAGTTGAAGAGCCAGTGCAAAATCCCTCTGGAATGCTCTCCCTGTTTTCAGATAAGCAGTTGTCTCACTCTTCTTTGAGACGTCATATATTAACCACACAGAGATGCTACTGCATTCTCTCAAGGCTCCCATTTTTTGAATTGCACTTTGGTGTATTGAACAGCATCTTCATGCAAGAAAGGCTAGAGCGGTTGACAAAAAGTGTTGGGGATTTAAATTTAGAATTTGTCGAAGGTAATTATGAGGAAGAAAACTCCAAGGGAAATTCAGAGTGTGTGCTGGTGAATGATAGACCATCAGAAGACAGACATGATGAAAATTCAAGAATTTCTCAATCAAATCTAAGAAATTCCCTTCCTGAAAACATTGAGGGTAATAGTAATCATCCAGAGAAACAAGTGGTTAATGAGGATCTGCATACATTTAAGGAGGGAGTTAATGATGAAAATGTTGTGCCAATTAATCCTGAAACTGATAGAAAAACTGCAAAAGAAGAATCTGGCTCTGCAAATGCTGAAGATAGTGATCTGTATGGAGATGCTTTAGTAACAAACAAACAGTCAGAAGATAGGCGTTTACCTAATGCTATTTTGCCACTCCTGCGCTATTGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAAGGTTCACCTTGTGAAGACAGAAATTTCAGGAGTGATGCTGATGATACTGAGACAGAAGAGGCTTCAATCTCTGGCCAAGAAGATTTAAACGACCTACATGATATTCTTGAATGGGCTAAGGCAAATAACTGTGGACCATTACAGATTATAAGTGAGTATTATAGTTTAAGTTGTCCTGCAAGGGGCTCGGCACTTACCTTTCATCCTTTGGAGCACCTTCATCCCTTGGAATATCACAGACCAGATGAGACAGTTCTTCATCTCGCTGGTTCAACTGTCGATTTGAAATCTTGCAGTATGGGTCTGGAACTAGCCGAGGCACATAACACTCTTCTGGCTGCGGAGGAGGCAACTTCATTATCTATATGGGCTGTAGCGTGCATATGTGGTACCTTGAGACTTGAAAATGTCTTGACATTCATTGCAGGAGCTCTACTGGAGAAGCAGATAGTAGTTGTCTGTTCTAATTTGGGAATCCTATCTGCATCAGTTTTATCAGTTATTCCGCTAATCCGGCCCTACCAGTGGCAAAGCCTGCTAATGCCGGTTTTACCAAATGACATGCTTGAGTTTCTGGATGCACCTGTCCCTTACATAATTGGTATCAGGAATAAGACCAATGAAGTTCAGTCGAAGTTAACCAATGTTATTCTGGTTGACGCCAATAGAAACCAGGTGAAGTCACCAACGATTCCTCAACTACCTAGACAGAAAGAGCTAATATCTTCTTTACATCCTTATCATGCAACTCTTGTGGGAGAAAGTTACTTGGGTAGGAGAAGGCCAGTGTACGAATGCACAGAAGTGCAGATAGAAGCTGCCAAGGGTTTTTTATCGGTGTTAAGGTCATATTTGGATTCCCTTTGCTATAACATCCGTTCTCATACAATAACCAATGTTCAATCCAATGACGATAAGGTATCCTTGCTTTTGAAGGAGAGTTTCATTGACTCTTTCCCTTATCGTGATCGGCCTTTCATGAAGCTTTTCGTGGATACACAGCTCTTCTCTGTGCACACAGATCTTGTTCTCTCTTTCTTTCAAAAGGAATAG 2418 0.4144 MAGMTKEEESVSPSWGASFFMQTTEDVARAVAAAVNSPRPSVVYSSKNNRGGSQLQRLQYQVTKLVKGFSRDPEVKYTNYNPETLTSQKRQWAANFHLQYMDHRSWKEPTQLFESMVIVGLHPNCDIQALERQYLVRKSEGSSKLRSALGYQNQSRVEPNLEPQVLFVYPPEKQLPLKDKDLLSFCFPGGLEVNAVERTPSMSELNEILYGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEEPVQNPSGMLSLFSDKQLSHSSLRRHILTTQRCYCILSRLPFFELHFGVLNSIFMQERLERLTKSVGDLNLEFVEGNYEEENSKGNSECVLVNDRPSEDRHDENSRISQSNLRNSLPENIEGNSNHPEKQVVNEDLHTFKEGVNDENVVPINPETDRKTAKEESGSANAEDSDLYGDALVTNKQSEDRRLPNAILPLLRYCQYESSESSCSFQGSPCEDRNFRSDADDTETEEASISGQEDLNDLHDILEWAKANNCGPLQIISEYYSLSCPARGSALTFHPLEHLHPLEYHRPDETVLHLAGSTVDLKSCSMGLELAEAHNTLLAAEEATSLSIWAVACICGTLRLENVLTFIAGALLEKQIVVVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNDMLEFLDAPVPYIIGIRNKTNEVQSKLTNVILVDANRNQVKSPTIPQLPRQKELISSLHPYHATLVGESYLGRRRPVYECTEVQIEAAKGFLSVLRSYLDSLCYNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRPFMKLFVDTQLFSVHTDLVLSFFQKE* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01828 805 MobiDBLite consensus disorder prediction 335 349 - -
Rops11g01828 805 MobiDBLite consensus disorder prediction 326 369 - -
Rops11g01828 805 Gene3D - 576 741 IPR043153 -
Rops11g01828 805 Pfam DENN (AEX-3) domain 563 677 IPR001194 -
Rops11g01828 805 Pfam uDENN domain 163 240 IPR005113 -
Rops11g01828 805 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 45 801 - -
Rops11g01828 805 MobiDBLite consensus disorder prediction 393 410 - -
Rops11g01828 805 MobiDBLite consensus disorder prediction 450 480 - -
Rops11g01828 805 SMART DENN_cls 271 679 IPR001194 -
Rops11g01828 805 Gene3D - 100 308 - -
Rops11g01828 805 MobiDBLite consensus disorder prediction 382 418 - -
Rops11g01828 805 MobiDBLite consensus disorder prediction 350 369 - -
Rops11g01828 805 SMART uDENN_cls 109 242 IPR005113 -
Rops11g01828 805 ProSiteProfiles Tripartite DENN domain profile. 143 805 IPR037516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01828 Rops-Chr11 29468495 29479899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01828 - - gmx:100782148 1402.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01828 11 29468495 29479899 Rops11g01828 11 29468495 29479899 ECH
Rops2g05142 2 92101444 92117680 Rops11g01828 11 29468495 29479899 PCT