Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01817 ATGGCTTCCACTTCTGCAGTTTCAATGGCAATGCCACTTACTTATGCCAGCCAGAAGAGGGTGGTGCCTAGCTCTGAGGCATTCTTGCCTCTACGGTCTTCAAAGGCTGTGTCAGCATCAAAATCCAATGGTAAGTTTCAAGTCAGGGCCTCCATGAAGGAGAAGGTTGTGACAGGGCTCACAGCAGCTGCATTGACAGCTTCAATGGTGGTTCCTGATGTGGCTGAAGCTGCCGTTTCACCTTCTCTTAAGAACTTCTTGCTCAGCATCGTGGCTGGCGGAGTTGTGCTTGTAGTTATTGTTGGTGCTGTGGTAGGTGTTGCCAATTTCGATCCCGTCAAGCGAGGCTGA 351 0.5043 MASTSAVSMAMPLTYASQKRVVPSSEAFLPLRSSKAVSASKSNGKFQVRASMKEKVVTGLTAAALTASMVVPDVAEAAVSPSLKNFLLSIVAGGVVLVVIVGAVVGVANFDPVKRG* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01817 116 Gene3D Single helix bin 78 116 - -
Rops11g01817 116 FunFam Photosystem II psbX protein 78 116 - -
Rops11g01817 116 PANTHER OS07G0673550 PROTEIN 1 116 - -
Rops11g01817 116 Pfam Photosystem II reaction centre X protein (PsbX) 79 115 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01817 Rops-Chr11 29240272 29240836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01817 - - gmx:100306291 173.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05153 2 92238303 92238948 Rops11g01817 11 29240272 29240836 PCT