Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01814 ATGAGTTTCATCTTCGGAAAGAGAAAAACACCCGCAGAGCTTCTGCGGGAAAATAAGAGAATGTTGGACAAGTCAATTAGAGAAATTGAGCGTGAGAGGCAAGGTTTACAAGCACAAGAGAAGAAATTGATTTTGGAGATAAAGAAAAGTGCCAAACAAGGCCAGATGGGAGCTGTTAAGGTTATGGCAAAAGATCTTGTTAGAACAAGGCATCAGATTGAAAAGTTTTATAAGCTAAAATCACAGCTCCAAGGTGTATCACTCAGAATTCAGACTCTGAAATCAACACAAGCAATGGGTGAGGCTATGAAAGGTGTGACAAAGGCCATGGGGCAAATGAATAGGCAAATGAACTTGCCATCTTTGCAGAAAATCATGCAAGAATTTGAGAGACAGAATGAGAAGATGGAATTGACTACTGAGGTGATGGGAGATGCAATTGATGACGCTTTGGAAGGGGATGAAGAAGAAGAAGAAACAGACGAACTAGTGAGCCAGGTTCTTGATGAGATTGGAATTGACATAAACCAAGAGCTTGTGAATGCACCATCATCAGCTGTTGCTGCTCCAGCTGCAAAGAGTAAGGTACCTCAAGTTGAAACTACAGGGAATGATGATAGTGGGATAGATAGTGATTTACAGGCAAGGTTAGACAATTTAAGAAAAATGTAG 672 0.4062 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVKVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTTEVMGDAIDDALEGDEEEEETDELVSQVLDEIGIDINQELVNAPSSAVAAPAAKSKVPQVETTGNDDSGIDSDLQARLDNLRKM* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01814 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 221 IPR005024 GO:0007034
Rops11g01814 223 Coils Coil 119 139 - -
Rops11g01814 223 Pfam Snf7 17 186 IPR005024 GO:0007034
Rops11g01814 223 Gene3D - 6 181 - -
Rops11g01814 223 Coils Coil 12 46 - -
Rops11g01814 223 MobiDBLite consensus disorder prediction 184 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01814 Rops-Chr11 29171186 29175246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01814 K12191 - zju:107424137 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01814 11 29171186 29175246 Rops11g01814 11 29171186 29175246 ECH
Rops2g05155 2 92246003 92248500 Rops11g01814 11 29171186 29175246 PCT