Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01806 ATGGGGGAAGAAGTGACTGTTACTGTAGCAAACTATCTCCATCGTGGAAACAATGGAAACGATGATCAGAGTCTGGAATTGGATATATACCCTTTGAGTTGTTACTATTTTGGATCCACAGATGCCATTCCCTTCAAAGATTACTCTTTAGCTGATCGTATTCAAAGGATGAAATCCAACTATGCTGCCCATGGAATGCGAACTTCTGTGGAAGCTGTCATACTGGTTGAGTTGTTCAAACATCCACATTTGTTGGTGTTGCAAGTAAAAAATTCCATCTTTAAACTTCCTGGTGGCCGCTTAAGGCCAGGTGAATCAGATATTGATGGATTGAAGCGTAAGCTAGCAAGGAAGCTTTTTGTTAATGAAAATGGGGATGGAGCAGAATGGGAGGTGGGTGAATGCCTTGGAATGTGGTGGAGACCTGATTTTGAAACACTAATGTATCCCTTCTTGCCACCTAACGTAAATCATCCAAAGGAGTGTACAAAACTCTTCCTTGTAAAGCTTCCAGAAAGTCGAAAGTTCATTGTGCCAAAGAACCTGAGGTTGCTTTCAGTCCCATTGTGCCAAATTCATGAAAATCACAAGACATATGGACCAATTATATCAGGTGTCCCACAGCTGCTCTCAAAATTCTCTTTCAATATGATCGAATCTTAA 663 0.4087 MGEEVTVTVANYLHRGNNGNDDQSLELDIYPLSCYYFGSTDAIPFKDYSLADRIQRMKSNYAAHGMRTSVEAVILVELFKHPHLLVLQVKNSIFKLPGGRLRPGESDIDGLKRKLARKLFVNENGDGAEWEVGECLGMWWRPDFETLMYPFLPPNVNHPKECTKLFLVKLPESRKFIVPKNLRLLSVPLCQIHENHKTYGPIISGVPQLLSKFSFNMIES* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01806 220 SUPERFAMILY Nudix 48 116 IPR015797 -
Rops11g01806 220 Pfam Nucleotide hydrolase 26 213 IPR016706 GO:0003729|GO:0005849|GO:0006378
Rops11g01806 220 PIRSF CPSF-25 3 220 IPR016706 GO:0003729|GO:0005849|GO:0006378
Rops11g01806 220 FunFam Pre-mRNA cleavage factor Im subunit 2 25 217 - -
Rops11g01806 220 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 22 219 IPR016706 GO:0003729|GO:0005849|GO:0006378
Rops11g01806 220 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 26 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01806 Rops-Chr11 29045434 29049617 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01806 K14397 - gmx:100791216 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01806 11 29045434 29049617 Rops11g01806 11 29045434 29049617 ECH