Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01797 ATGGAGTGCGTTGGAGTGAGAAACTTGGCGGCAATGGCGTTTTGCGTAAGCCCTTCTTCGAGGTTTCGGTTACGAAGGAAGAAGCTTTGGAGAAGACGAACGTCGTCGTTTGGCCACGCCATTCGTTGGCGCTCGCATTGTCTTAAGGTGGAAGCCAAAGCCGGTGCAGGAAGTGAGAGTTGCGTGGTGACCAAAGAGAACTTTGCCGATGAAGAAGATTACATTAAAGCCGGTGGCTCTGAACTTGTTTTTGTTCAAATGCAACAGAACAAAGCCATGGAAATGCAATCCAAGCTTGCGGATAAGTTGCCGCCTATCTCTGTAGGAGATGATACACTGGATCTGGTTGTGATTGGTTGTGGTCCGGCTGGTCTTGCTCTGGCTGCTGAATCTGGCAAGTTAGGATTAAAAGTTGGGCTTATCGGTCCGGATCTTCCTTTTACAAACAATTATGGTGTGTGGGAGGATGAATTTAAAGATCTTGGACTTGAAGGTTGTATTGAGCATGTTTGGAAGGACACCGTTGTTTATCTTGACAATAAGGATCCCATTTTTATCGGACGTTCTTATGGACGTGTCAGTCGGCATCTGCTTCATGAGGAATTGTTAAGAAGGTGTGTCGAGTCAGGTGTTTCATATCTTAACTCAAGAGTAGAAAGAATTGTTGAGGCTAGCAATGGTCATAGTCACATTGTCTGTGAATATGATATTGTAGTGCCCTGCAGGCTTGCTACTGTTGCATCAGGAGCAGCTTCAGGGAAACTATTGCAGTATGAGGTTGGGGGTCCAAAGGTGTCTGTCCAAACGGCTTATGGTGTGGAAGTCGAGGTGGAAAACAATCCTTATGATCCAAACCTGATGGTTTTCATGGATTACAGAGACTACATGAAGCAAAATGTTCAATGTCTAGAAGCAAGTTATCCAACATTTCTTTATGCAATGCCAATGTCTCATACAAGAGTGTTCTTTGAGGAAACCTGTTTGGCATCTTTTGATGCCATGCCCTTTGATTTATTAAAGAAAAAGCTCTTTTCAAGATTAAATACGATGGGGATCAGAATTACAAAAACTTATGAAGAGGAATGGTCTTATATCCCAGTTGGTGGATCCTTGCCAAACACAGAGCAAAAGAACCTTGCATTTGGTGCAGCTGCCAGCATGGTGCATCCAGCCACAGGCTACTCCGTGGTGAGATCTTTGTCAGAAGCTCCAAAATATGCTTCAGTAATTGCTACTATTTTGAAAGAGGGTCATGCAAGGGACATTATTACTCATGAAAGAAGTAAGGAGAATCTATCTATGCAAGCTTGGAATACACTTTGGCCACAAGAAAGGAAACGGCAGAGAGCATTCTTTCTTTTTGGATTAGCACTAATTATACAGCTGGACATTGAGGGCATTAGAACATTCTTTCGTACTTTCTTCTGCTTACCTGATTGGATGTGGCAAGGATTTCTTGGCTCGTCTCTCTCCTCGACAGATCTTGTATTGTTTGCATTCTATATGTTCATAATAGCACCAAATAACTTGAGAATGTGTCTAGTCAAACATCTGCTTTCAGATCCTACTGGGACAACTATGATAAGGACCTACTTAACGATATAG 1605 0.4287 MECVGVRNLAAMAFCVSPSSRFRLRRKKLWRRRTSSFGHAIRWRSHCLKVEAKAGAGSESCVVTKENFADEEDYIKAGGSELVFVQMQQNKAMEMQSKLADKLPPISVGDDTLDLVVIGCGPAGLALAAESGKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWKDTVVYLDNKDPIFIGRSYGRVSRHLLHEELLRRCVESGVSYLNSRVERIVEASNGHSHIVCEYDIVVPCRLATVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYMKQNVQCLEASYPTFLYAMPMSHTRVFFEETCLASFDAMPFDLLKKKLFSRLNTMGIRITKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIATILKEGHARDIITHERSKENLSMQAWNTLWPQERKRQRAFFLFGLALIIQLDIEGIRTFFRTFFCLPDWMWQGFLGSSLSSTDLVLFAFYMFIIAPNNLRMCLVKHLLSDPTGTTMIRTYLTI* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01797 534 NCBIfam lycopene cyclase family protein 114 513 IPR010108 GO:0016117|GO:0016705
Rops11g01797 534 SUPERFAMILY FAD/NAD(P)-binding domain 110 507 IPR036188 -
Rops11g01797 534 Gene3D - 110 473 IPR036188 -
Rops11g01797 534 FunFam lycopene epsilon cyclase, chloroplastic 110 453 - -
Rops11g01797 534 PANTHER - 20 532 - -
Rops11g01797 534 Pfam Lycopene cyclase protein 114 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01797 Rops-Chr11 28844031 28857352 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01797 K06444 - gmx:100790686 951.044