Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01786 ATGGTGGTTCGGATTAGGCTATCACGGTTCGGGTGCAAGAACAAGCCATTCTACCGTGTAATGGCTGCAGATAGCAGATCCCCAAGAGATGGCAAACACCTCGAAGTTCTTGGTTACTACAATCCCTTACCAGGTCAAGATGGTGGCAAAAGAATGGGTCTCAACTTTGATAGAGTCAAGTATTGGCTTTCTGTTGGAGCTCAACCTTCGGAGCCAGTAGAGCGTCTTTTATTTCGATCAGGGTTGCTTCCACCGCCACCGATGGTGGCGATGGGGCGGAAAGGTGGACCACGTGATACGCGCCCTGTTGATGCGTTAACTGGACGCGTCATCGATCAAGAGAAGCCGGTTAATTCCAACGGCAATGAAAATAACACTGGAAAGTCTTGA 390 0.4949 MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSEPVERLLFRSGLLPPPPMVAMGRKGGPRDTRPVDALTGRVIDQEKPVNSNGNENNTGKS* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01786 129 PANTHER 30S RIBOSOMAL PROTEIN S16 1 102 IPR000307 GO:0003735|GO:0005840|GO:0006412
Rops11g01786 129 SUPERFAMILY Ribosomal protein S16 3 94 IPR023803 -
Rops11g01786 129 Gene3D - 1 124 IPR023803 -
Rops11g01786 129 MobiDBLite consensus disorder prediction 86 129 - -
Rops11g01786 129 Pfam Ribosomal protein S16 9 70 IPR000307 GO:0003735|GO:0005840|GO:0006412
Rops11g01786 129 Hamap 30S ribosomal protein S16 [rpsP]. 2 80 IPR000307 GO:0003735|GO:0005840|GO:0006412
Rops11g01786 129 FunFam 30S ribosomal protein S16 1 107 - -
Rops11g01786 129 NCBIfam 30S ribosomal protein S16 3 82 IPR000307 GO:0003735|GO:0005840|GO:0006412
Rops11g01786 129 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01786 Rops-Chr11 28701492 28703092 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01786 K02959 - gmx:100305630 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01786 11 28701492 28703092 Rops11g01786 11 28701492 28703092 ECH