Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01756 ATGGCCAAATCTGCGAGAATCACGGTCACAGCTATGGCAGTGATAGCTTTGGCAACCTCTCTCTTTTGGGTTTCTTCAGTTTCAGCTTCTGCTTCATCTGTCGGCGAGTTTGTCGACAAAACCATCTCTTCCCACAAGATCGTTATCTTTTCAAAGACCTATTGCCCGTACTGCAATAGAGCAAAAGCTGTTTTCAAAGAGTTGAATCAAGTGCCACATGTTGTTGAGCTCGATGAGAGAGATGATGGTTCGAAGATTCAGGAAATCATGATTAATATTGTTGGGAGGCGTACTGTGCCACAAGTTTTCATTAATGGAAAACACCTTGGAGGCTCAGATGATACTTTTGAAGCTTATGAGAGTGGACGTCTGGCTAAACTTCTAGGAATTGAGACAAAGGATCATGATGATCTCTGA 417 0.4269 MAKSARITVTAMAVIALATSLFWVSSVSASASSVGEFVDKTISSHKIVIFSKTYCPYCNRAKAVFKELNQVPHVVELDERDDGSKIQEIMINIVGRRTVPQVFINGKHLGGSDDTFEAYESGRLAKLLGIETKDHDDL* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01756 138 ProSiteProfiles Glutaredoxin domain profile. 35 135 - -
Rops11g01756 138 PANTHER GLUTAREDOXIN 2 21 129 - -
Rops11g01756 138 Gene3D Glutaredoxin 25 129 - -
Rops11g01756 138 NCBIfam glutaredoxin 47 128 IPR011899 -
Rops11g01756 138 SUPERFAMILY Thioredoxin-like 36 128 IPR036249 -
Rops11g01756 138 FunFam Glutaredoxin 2 29 134 - -
Rops11g01756 138 Pfam Glutaredoxin 47 108 IPR002109 -
Rops11g01756 138 ProSitePatterns Glutaredoxin active site. 49 64 IPR011767 -
Rops11g01756 138 PRINTS Glutaredoxin signature 106 119 IPR014025 -
Rops11g01756 138 PRINTS Glutaredoxin signature 47 65 IPR014025 -
Rops11g01756 138 PRINTS Glutaredoxin signature 92 105 IPR014025 -
Rops11g01756 138 CDD GRX_GRXh_1_2_like 46 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01756 Rops-Chr11 28163585 28165562 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01756 36 128 Miscellaneous Gene Families AT4G15700 33.333 5.72e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01756 K03676 - gmx:100777703 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01756 11 28163585 28165562 Rops11g01756 11 28163585 28165562 ECH