Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01727 ATGAGCTTCTCTCAATCGAAGTTCCACACTCTCTCACATCTCGTTGATATTATCACAGAGAAATCAAAGCACACACTGTTGCGTTCTTATAGCATAATGGACTCAGATGCTGAAGACACAAAATCCCAATCCCAACTAGAGCCAAAACCCAAGAAGATTAAGAACAAGAAGAAAAAAAAGGAAAAGGATACCCCACCCGAACCGGTTCAGGCCAAGGTCCAAGTTGTCCGTGAGCACCCGGATAAAACACCTCCTGTTATTGGCTATTTTCCTTCTGGTTTTGATCCGGTCAACTCTTCTGGCAGTGGTTCTGGTCCAACCAGCTTCCAACTATTCCGAAACAGGGAAAAGAACAAAGCCAAGAGGCTGCAGCTTGTGGTCAGCCCTGCCGGGTCTCCGGTGGAATTCGTTGGAACAAGTTATTCCGGTGAGGCTGCGGCCGGACACCTGGCCATGTATGCGCTCGGGGTCTTTGACAAGGAAGCTCAGACCCTGAAGGTTGTGCCCATTGCTGCTAATAAGATATTCAGATTGGATCCGAAAGTTAAAGCCTTGGAAGCTGCTGACAAGGAGCCTGCTGACTCGACGATGGAAGAGCCGACTCCGCAACAGAATGCAGTCAAAATGCAGCAGACTACTGCTCTGTGGGGGACAAAGAAGGAAATAGAGAAGGCTAAGAAGAAGCTAGCTCTCAGACAAGATGATGATCCTGATTCTCAAAAGAATCTGGATGTGAAAATGAAAAATGTTGTTGTAAACAAAAAGGCTCTTGAAAGCACAGAATCTCATGTTTCTCGCAATATACCACCATATGATACTTCTGCGACTACACCTCAGGAGGCTTATGTGTTGGACGAAATCATCCTTAAAGGAGAATGGGATTACCTTGAAGACATCTATAATATTATGCAGCTGGGAGAAGAAGCAGACTTCAGTGCTTACCCAACTTTTATTTGCAACAGGATACAGAAATTAAAGAAGATTAAGGATGAGTCAGAAAAGAAGAAGCTGTCTTGCATATTCTCATTCATCAATCATCTTATAAAGTTCAAAGATCAGCATTCAATGGATGGTTTTTCCTCTGCAAAGGGCCATAAAATCCCCAACATTCTGTATCATAGATTTAAGAGAAAGTTTGATGTTTCTGACACAAAAAGGCTGCCTGCTGAAAAGATAAATCTTCTCATTTGTTACGTCTTGGTGCTGACTCTTTTCTCTGATGAATTCCAAACTGAATACACAGATATAGCAAAGGATCTGAGGATAAGTGCAGTGCCTGTGAGACAACTATATGAGCATTTGGGTTGCAAAATTTTGCGCCGGCATAATATGTTTTATGCCACGCTTCCTGTACCTCTCAAATTTCCTGATTTGAGGCAAAAGAAGCGAAAAAGGTAG 1398 0.4306 MSFSQSKFHTLSHLVDIITEKSKHTLLRSYSIMDSDAEDTKSQSQLEPKPKKIKNKKKKKEKDTPPEPVQAKVQVVREHPDKTPPVIGYFPSGFDPVNSSGSGSGPTSFQLFRNREKNKAKRLQLVVSPAGSPVEFVGTSYSGEAAAGHLAMYALGVFDKEAQTLKVVPIAANKIFRLDPKVKALEAADKEPADSTMEEPTPQQNAVKMQQTTALWGTKKEIEKAKKKLALRQDDDPDSQKNLDVKMKNVVVNKKALESTESHVSRNIPPYDTSATTPQEAYVLDEIILKGEWDYLEDIYNIMQLGEEADFSAYPTFICNRIQKLKKIKDESEKKKLSCIFSFINHLIKFKDQHSMDGFSSAKGHKIPNILYHRFKRKFDVSDTKRLPAEKINLLICYVLVLTLFSDEFQTEYTDIAKDLRISAVPVRQLYEHLGCKILRRHNMFYATLPVPLKFPDLRQKKRKR* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01727 465 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 71 465 IPR009668 GO:0003677|GO:0006351
Rops11g01727 465 Pfam A49-like RNA polymerase I associated factor 107 456 IPR009668 GO:0003677|GO:0006351
Rops11g01727 465 MobiDBLite consensus disorder prediction 33 70 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01727 K03005 - gmx:100812427 578.941