Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01717 ATGAAGACAGAAAAAGTTTGGCGCCTAGGCATGGGTGATATGCAGATCTTGCCCGGGTCTCGCCACCGTCCTCCAATGAAGAAGCCAATGTGGATCATTGTCTTGGTTTTGTTTGTGTGCGCATTTCTAATATGTGCTTATATTTACCCGCCAAAAAGCAGTACAACTTGTTCCGTCTTTTCTTCTAAAGGGTGCAAGGCTATTGCTGATTGGCTTCCACCTGTTCCTGCAAGGGAATACACGGACAACGAGATTGCATCACAAGTTGTTATTATGGATATTTTGAACACGCCACCAGTTTCAAAAAATCCAAAAATTGCCTTCATGTTTTTGACTCCTGGTTCTCTACCATTTGAAAAGTTATGGGATAAATTTTTCCAAGGTCATGAAGGGAAGTTCTCTGTTTATGTGCATGCATCTAAGACTAAACCAGTTCATGTGAGCCGTTATTTTGTTAATCGGGATATACGCAGCGACCAGGTGGTATGGGGTAAAATTTCTATGGTTGATGCAGAGAGACGATTACTGGCAAATGCCCTGCAAGATCCTGATAACCAGCAATTTGTTCTACTTTCTGATAGCTGTGTGCCACTGTATAATTTTGACTATATTTTTGATTATCTGATGCATACAAATATCAGCTTTGTGGACAGCTTTAGGGATCCTGGTCCTCATGGCAATGGCAGGTATTCAGAACACATGTTACCCGAAGTGGAGATTAAGGACTTCAGAAAGGGTGCTCAGTGGTTTACTATGAAGCGGCAGCATGCTTTAATAGTTATGGCTGACAACCTGTATTACTCAAAATTTCGGGCTTACTGTAAGCCTGGTTGGGAAGGGAAAAATTGCATAGCAGATGAACATTACTTACCTACCTTCTTTAAGATTGTCGATCCTGGTGGAATTGCAAACTGGTCTGTAACTCATGTTGACTGGTCTGAGAGAAAATGGCATCCAAAATCATATAGGGCTGAGGATGTTACATACGAGCTTTTGAAGAATATTACGTCCGTTGATGTAAGTGTGCACGTAACGAGTGATGGGAAGAGAGAAGTACAAAGCTGGCCTTGCTTATGGAATGGGATTCAGAAGCCATGTTACCTATTTGCTAGGAAATTCACTCCTGGAACACTGGACAGCTTGTTGCTGCTTTTATCAAATTATTCATCAGCTTGA 1176 0.4167 MKTEKVWRLGMGDMQILPGSRHRPPMKKPMWIIVLVLFVCAFLICAYIYPPKSSTTCSVFSSKGCKAIADWLPPVPAREYTDNEIASQVVIMDILNTPPVSKNPKIAFMFLTPGSLPFEKLWDKFFQGHEGKFSVYVHASKTKPVHVSRYFVNRDIRSDQVVWGKISMVDAERRLLANALQDPDNQQFVLLSDSCVPLYNFDYIFDYLMHTNISFVDSFRDPGPHGNGRYSEHMLPEVEIKDFRKGAQWFTMKRQHALIVMADNLYYSKFRAYCKPGWEGKNCIADEHYLPTFFKIVDPGGIANWSVTHVDWSERKWHPKSYRAEDVTYELLKNITSVDVSVHVTSDGKREVQSWPCLWNGIQKPCYLFARKFTPGTLDSLLLLLSNYSSA* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01717 391 Pfam Core-2/I-Branching enzyme 106 335 IPR003406 GO:0016020|GO:0016757
Rops11g01717 391 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 31 382 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01717 Rops-Chr11 27073124 27079657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01717 - - gmx:100817202 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01717 11 27073124 27079657 Rops11g01717 11 27073124 27079657 ECH