Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01711 ATGGGATGTTCACAATCAAAGTTGGATGATGAAGAAGCAGTTCAGCTTTGTAAAGATAGAAAAAGGTTCATCAAGCAAGCTGTTGAGCAAAGAACTAGATTTGCAGCAGGACACATAGCTTACATTGAATCTCTGAGAAGAGTTTCAGCAGCACTTCGTGATTACATTGAAGGAGATGAACCTCGTGAGTTCTCATTAGATACAATGATCACACCACCTTTCACACCTGTGAAGAAAACTGGCCCTCCTGGTTTCATTCCCATTTCAGCAAAATCCTTCACACCAACAGCAATTGAGTTTGGAGTTGGACCAAATTCAACTTTGAAAGTGAATTACCTTAGGCCAGGTGGTAATCCTGCAATTTCAGTTGAGGAAAGGCCTCAATCTCCTGAAAGGGTCCGGGTTGAAACATATTCTCCAATGCAGCATCATGGTGGCATTGATGGTTTTTTTGCTATGCAATCCTCACCTGTGAATCCCTCTATTTTTGCTTATTCTCCCAATAATAGGCCTAGTATACCTCCCCCTTCACCTCAAAATTCTCAATGGGATTTCTTTTGGAACCCTTTTTCATCATTGGACTACTACGGTTATCCTACTCGAAATAGCATTGACCAGGCTGCTATGGATGATGAATACAGAGGACTGAGGCAGGTCCGAGAAGAAGAGGGAATACCAGACCTGGAAGAAGAGGAAACTGAACAAGAAGATTATGTTCAAAGGAGAAATGTAGCAGAAGAAAGAACCAGAACTGATATAAATTCCTCCAAAGATGAAGTCATTGTTGAAGATGTTGATGATGATGAAGATGAAGATGATGCTGATGATGATGATGAGGAGGAGGAGGAGGAGGAAGAGGAAGAAGAAGAGGAGGGAACAAACACTGAAACTGAAACTGAGCATGATGCCAAAGGTTCACAAGCCCATGATTTTGAAGTATCAAAAGCTCAAACTGCAGGTCATATTGACTCTGGCCACAGGGAAATGGCAATTGGTAATCAAGAAGCTAAGGAAGAAACACCAGGTTTTACTGTCATTGTAAACCGAAGGCCAACAAGCATGGCAGAAGTGATCAATGATCTTGAAGCTCAGTTCACGATTGTCTGCAATGCAGCCAATGATGTCTCAGCATTGTTAGAGGCCAAGAAAGCTCAGTATTTATTGACATCTAATGAACTTTCAGCATCAAAGTTGTTGAACCCAGTAGCTCTGTTGCGGTCAGCTTCTTCACGCTCTTCTTCTGCAAGATTTTTAATGAATAGTTCAAGCACTGGAGCGAAAGGTTATGGGGGCACTAAGGATACCTCAGAGGAACATTGTATGATTTCTGGTAGTCACCAATCCACATTGGACAGATTAAATGAATGGGAGAAGAAGCTCTATGAGGAAGTCAAGTCTGGAGAACGTGTCCGAATTGCATATGAGAAAAAATTAAAGCAGCTAAGGAACCATGATGTAAAAGGAGAAGACCCCTTTTCTGCAGATAAAACAACGGCAGCCATTAGAGATCTAGATACCCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCAGGAGAATTGAAACTCTAAGGGATGAAGAGTTGCATCCCCAACTAATTGAAATGGTGCATGGGCTGGAAAAGATGTGGAAAGTGATGGCAGAATGTCATCAAACACAGAAGAGAACCTTAGATGAAGCTAAGATTCTTCTAGCTGGCACTTCTTCTAAACTTTATGCCAGAAAACATTCTTCCATGTCAATGGTTGATCCAAATAGGCTTGCCCGTTCAGCCTCTAATCTTGAATCCGAGTTAAGGAACTGGCGAAACACATTTGAGTCATGGATCACTTCTCAAAGATCCTATATTCATGCACTAACTGGATGGCTTCTCAGATGTATGAGATCTGAGCCTGATGTGTCGAAATTACCATGCTCTCCTCATAGGTCCAGTGGCACTCATCCACTCTTTGGACTTTGTGTTCAGTGGTCAAGGCGTTTAGATGCCATACATGAAAAGGCAGTGCTTGATGGCATGGACTTTTTTGCAGCTGGAATGGGGTCTCTCTATGCACATCAATTGAGACAAGATTCTAGGCCAAATTCTTATGAATCAAAACAAAACAATGGGAGTATGGAAATGGTGGAAGTTGGTCAGGTGGAAGAGGTTATGGCTCCAGAAAAATTGGCTGAAGTTGCTATCAAGGTACTTTGTGCTGGAATGTCTGTTGCTATTAGCTCATTGGCAAAGTTTGCTATTGATTCTGCTGAGGGATACAATGAAGTTGTTAAACAATGGGAGAATGTGAAGTCTAAGGATACTTCTAGTGAGACTAATTAG 2325 0.4163 MGCSQSKLDDEEAVQLCKDRKRFIKQAVEQRTRFAAGHIAYIESLRRVSAALRDYIEGDEPREFSLDTMITPPFTPVKKTGPPGFIPISAKSFTPTAIEFGVGPNSTLKVNYLRPGGNPAISVEERPQSPERVRVETYSPMQHHGGIDGFFAMQSSPVNPSIFAYSPNNRPSIPPPSPQNSQWDFFWNPFSSLDYYGYPTRNSIDQAAMDDEYRGLRQVREEEGIPDLEEEETEQEDYVQRRNVAEERTRTDINSSKDEVIVEDVDDDEDEDDADDDDEEEEEEEEEEEEEGTNTETETEHDAKGSQAHDFEVSKAQTAGHIDSGHREMAIGNQEAKEETPGFTVIVNRRPTSMAEVINDLEAQFTIVCNAANDVSALLEAKKAQYLLTSNELSASKLLNPVALLRSASSRSSSARFLMNSSSTGAKGYGGTKDTSEEHCMISGSHQSTLDRLNEWEKKLYEEVKSGERVRIAYEKKLKQLRNHDVKGEDPFSADKTTAAIRDLDTQITVSIHSVEAISRRIETLRDEELHPQLIEMVHGLEKMWKVMAECHQTQKRTLDEAKILLAGTSSKLYARKHSSMSMVDPNRLARSASNLESELRNWRNTFESWITSQRSYIHALTGWLLRCMRSEPDVSKLPCSPHRSSGTHPLFGLCVQWSRRLDAIHEKAVLDGMDFFAAGMGSLYAHQLRQDSRPNSYESKQNNGSMEMVEVGQVEEVMAPEKLAEVAIKVLCAGMSVAISSLAKFAIDSAEGYNEVVKQWENVKSKDTSSETN* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01711 774 Pfam Protein of unknown function (DUF632) 354 681 IPR006867 -
Rops11g01711 774 Coils Coil 271 300 - -
Rops11g01711 774 PANTHER UNCHARACTERIZED 1 762 - -
Rops11g01711 774 MobiDBLite consensus disorder prediction 221 309 - -
Rops11g01711 774 Coils Coil 228 248 - -
Rops11g01711 774 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Rops11g01711 774 MobiDBLite consensus disorder prediction 261 296 - -
Rops11g01711 774 MobiDBLite consensus disorder prediction 235 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01711 Rops-Chr11 26759423 26764224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01711 1 238 Acyl Lipid Metabolism Gene Families AT2G27090 28.629 1.21e-16 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01711 - - gmx:100780704 1178.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01711 11 26759423 26764224 Rops11g01711 11 26759423 26764224 ECH
Rops2g05252 2 93774063 93777725 Rops11g01711 11 26759423 26764224 PCT