Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01703 ATGTTGGGTGGTGGCATCTCAACCCCAACAACTCAAAGCCTCAAGGCAACAAGTACAATTGCAATATGTTATCCAACTCATAGATTACTGTCCACCCATTTTTGTCTCTTTAAGAATTTACTATCAAGTGGCAGAGGATTTTCTTCAAAAGAGAGTTGTTTTCTCAGAGGTCACCAAATCAACATTAAGCAATTTTTTGGGCTTATCTCCAGTCGTGCTCCACGAAACAAAGCAGGAGTTGTTGTTTCTCCAAGCTGTGTCCTGCCACTTACAGAAGAGAATGTGGAGAAGGTTTTGGATGAGGTAAGGCCTGGCTTGATGGCTGATGGAGGGAATGTGGCTTTGCATGAGATAGATGGCCTTATTGTTGTCCTCAAGCTACAAGGAGCATGTGGATCGTGTCCTAGCTCAACTATGACATTAAAGATGGGAATTGAAACTCGCCTCCGGGATAAGATTCCTGAAATCATGGAAGTGGAGCAGATACTAGACACTGAGACTGGTCTTGAATTAACTGAAGAAAATGTTGAAAGTGTTCTTTCTGAAATTAGACCCTACCTTGTTGGCACTGGGGGAGGAATTTTAGAGCTTGTTCAGATCAATGATTATGTTGTCCAAGTTAGGCTAAGTGGACCTGCTGCTGGGGTTATGACAGTTCGTGTTGCCTTAACACAGAAGTTAAGAGACAAGATACCTTCTATTGCATCTGTGCAGCTAATAGATTGA 726 0.4242 MLGGGISTPTTQSLKATSTIAICYPTHRLLSTHFCLFKNLLSSGRGFSSKESCFLRGHQINIKQFFGLISSRAPRNKAGVVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLIVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIMEVEQILDTETGLELTEENVESVLSEIRPYLVGTGGGILELVQINDYVVQVRLSGPAAGVMTVRVALTQKLRDKIPSIASVQLID* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01703 241 Gene3D - 170 241 IPR034904 -
Rops11g01703 241 Pfam NifU-like domain 176 238 IPR001075 GO:0005506|GO:0016226|GO:0051536
Rops11g01703 241 Pfam NifU-like domain 95 160 IPR001075 GO:0005506|GO:0016226|GO:0051536
Rops11g01703 241 FunFam NifU-like protein 3, chloroplastic 170 240 - -
Rops11g01703 241 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 90 239 - -
Rops11g01703 241 FunFam NifU-like protein 3, chloroplastic 87 169 - -
Rops11g01703 241 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 92 166 IPR034904 -
Rops11g01703 241 Gene3D - 87 169 IPR034904 -
Rops11g01703 241 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 170 240 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01703 Rops-Chr11 26620483 26622471 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01703 - - gmx:100806364 384.8