Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01604 ATGCCACAACCACGAGAGCTTCCTGGGTTTTATTATGACCCAGAGAAGAACAGGTATTTCCCCATCAAAGGCCCCATTCCTGGTTCTTCTTCTTCTTCATCTAAGACTAAGACCATTGCTACTCTAAAGTCACCCCAAACCTCTTCAACTCAGGAAAGGAAGAGTAGGAGTTCTTATAGGAAGCTTAGAAATATAACTTCTAAGCTGCTTCAGGTTAGGGAGTTAGATGGTCATCATGTCACTGCCTCTCATTATTCCAAGTGTAACTTCACTGAGGAATTCCGCAAAATACAAGCATCTCAACCTGCTGTCTGGAAATATCAGGGAACTGATAAAATAGGTATTAGTGCTTTGGAACACATGCACGTTAATGTGCAGACAGGAGAAGGTCAATTTGAAACTGATGTTTTATTGACTGGAAGCATAAATGGCTCGCTGAGTTTTTCTGAAGTTGGAAGGGTTGGGCAAGATTTTGATGGTGGGGTAAAGTGGATGCCAGATTGTGTGAAGAATTATGTTAAAGGGAAAACAGATCATGAACATAATGAGGGGCCAGGGCCGGTTTTCAGACCTAATGGAGCTTCGCTGGTTATGTCCTCCAGAATATCTTGTATAAGATTGGGTCCAACGTGCTCTTCTCGTGCTGTGAATGATGGTCCTATTCTTGGACATGCAATATTTACTACTTTGGGATCAGAGACATCAGGTGGATCAGTTTACACGCTTGGTCTTGTTGAACCATTAGACCTTGGACCAGGTATACTGAACACATGGAGCAGACTAGAGGAAATTGCTTCTTTCAGGTGTACCCTTTGGACAGCAGAATATGATTATAATAGACACCGGGCTATAATTGGTACTAATATCGGAGGTGCTTCAGTGGATCTGGAAACTGGGATGACATCATGGTTTTTACGTTGTAAAAGTGACATTTTAGCACAACAGATCGTTAATTCAGGAAATGTGATTTTATGTGGACTCAGAAATGGTGCAATTGTTACTGTAGATTTTCGTCAGAAAAGAGACAGGCTTTCCAGTGGACTTATTACGCATCGGATACCGTATACATCTCCAACTAAGAAAATTGGAAGTTCTAATAAAGAATGGTTCAAGCTAGCTGGACATATATATCCTTCTCATACCATTAGGATGCCTTCATCTATATCCTGTTTGGTGTCACTTCAGTTTGATGATCAGTATTTCTTGGCAAGCTCCATGGATGGATCGATAAAACTCTATGATCGTCGCCTACTCCAAAGGGGTGCTGTTCAAGCTTATGAAGGGCATGTGAATTCCCATTCTCATATACAGCTTGGTGTTGATCCAACTGAAAGATTTGTTATGTCAGGTGGAGAGGATTGCAAGCTTCGGTTATGGAGTATCAAGTCTGGCGAACTGCTTTTGGAGGATAAGTTCTCTGATTCAGTTCTCTCCACTGTGTGCTATCAAACAAGTAAAAGTAGTTTTAAAGCAGGAGCAGAAAACGAAAACAAGTATGATTCTTCTCTGGGTGCATGGCTTGGATCACATGAAGGACTATATTATATGCACTGGTTATGA 1560 0.4128 MPQPRELPGFYYDPEKNRYFPIKGPIPGSSSSSSKTKTIATLKSPQTSSTQERKSRSSYRKLRNITSKLLQVRELDGHHVTASHYSKCNFTEEFRKIQASQPAVWKYQGTDKIGISALEHMHVNVQTGEGQFETDVLLTGSINGSLSFSEVGRVGQDFDGGVKWMPDCVKNYVKGKTDHEHNEGPGPVFRPNGASLVMSSRISCIRLGPTCSSRAVNDGPILGHAIFTTLGSETSGGSVYTLGLVEPLDLGPGILNTWSRLEEIASFRCTLWTAEYDYNRHRAIIGTNIGGASVDLETGMTSWFLRCKSDILAQQIVNSGNVILCGLRNGAIVTVDFRQKRDRLSSGLITHRIPYTSPTKKIGSSNKEWFKLAGHIYPSHTIRMPSSISCLVSLQFDDQYFLASSMDGSIKLYDRRLLQRGAVQAYEGHVNSHSHIQLGVDPTERFVMSGGEDCKLRLWSIKSGELLLEDKFSDSVLSTVCYQTSKSSFKAGAENENKYDSSLGAWLGSHEGLYYMHWL* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01604 519 MobiDBLite consensus disorder prediction 21 58 - -
Rops11g01604 519 Pfam WD domain, G-beta repeat 375 414 IPR001680 GO:0005515
Rops11g01604 519 Pfam WD domain, G-beta repeat 424 460 IPR001680 GO:0005515
Rops11g01604 519 MobiDBLite consensus disorder prediction 26 53 - -
Rops11g01604 519 Gene3D - 265 509 IPR015943 GO:0005515
Rops11g01604 519 SUPERFAMILY WD40 repeat-like 295 481 IPR036322 GO:0005515
Rops11g01604 519 SMART WD40_4 419 460 IPR001680 GO:0005515
Rops11g01604 519 SMART WD40_4 375 414 IPR001680 GO:0005515
Rops11g01604 519 PANTHER DDB1- AND CUL4-ASSOCIATED FACTOR 4-RELATED 1 518 - -
Rops11g01604 519 ProSiteProfiles Trp-Asp (WD) repeats profile. 438 469 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01604 389 471 Miscellaneous Gene Families AT5G08390 31.765 1.13e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01604 K11799 - gmx:100798753 803.897