Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01558 ATGCTGGAACGGTGTCTGGGAACTCGACGAGTCCGTCAGATCCAAAGGACGTGCCGTCACAGCACCGTCACCTTCCTCTGCCTCTTCCTCACTTTCATCGTCCTACGTGGCACCATCGGCGCCGGAAAATTCGGCACCCCAGAGCAAGACCTCTACGAGATCCGCCACCACCTCTCCGCCGCACGTACCCGCCGCGTCCTCGAAGAATCCCAACCCGACAACAACAACAACAACAACAACCTCAACAACTACGAAACCTTCGATCTCTCGAAGATCCTCGTCGACGAAGACCCCGCCGGCGATGACGAAAAGCGTGACCCTCACGCGTCCTATACCCTAGGCCCCAAGATTTCAAATTGGGACGAACAGCGTGAAGAATGGCTCCGAAACAATCCGGGTTACCCGAATTTTATCGGACCCAATAAGCCACGTGTTCTTTTGGTAACTGGGTCATCACCAAAACCGTGTGAGAACCCGGTTGGGGATCATTACCTTGTAAAGTCTATTAAAAACAAAATAGATTATTGTAGGGTTCATGGGATTGAGATTTTCTACAATATGGCACTTTTGGATGCTGAAATGGCTGGGTTTTGGGCTAAGCTTCCATTGATTAGGAAGCTTTTGTTGTCTCACCCTGAGGTTGAGTTTCTATGGTGGATGGATAGTGATGCTATGTTCACTGACATGGCATTTGAGGTGCCATGGGAAAGGTATAAAGATTCAAACTTTGTGATGCATGGGTGGAATGAGATGGTGTATGATGAGAAGAATTGGATTGGTTTGAACACCGGGAGTTTTCTGTTGAGGAATTGTCAGTGGTCTTTGGATCTTCTTGATGCTTGGGCACCAATGGGTCCTAAAGGGAAGATAAGGGATGAGGCCGGGAAATTGCTCACTAGGGAGCTTAAGAATAGGCCTGTTTTTGAAGCTGATGATCAATCTGCTATGGTTTATCTTTTGGCAACTGGGAGGGAGAAATGGGGTGATAAGGTTTATCTCGAGAATGGTTATTACTTGCATGGGTATTGGGGGATTTTGGTGGATCGTTATGAGGAGATGATTGAGAATTATCACCCTGGTCTTGGAGATCATAGGTGGCCTTTGGTTACTCACTTTGTGGGTTGCAAGCCTTGTGGTAAGTTTGGGGATTACCCTGTTGAGAGGTGCTTGAAACAAATGGATAGAGCCTATAATTTTGGAGATAACCAGATTTTGCAGATGTATGGGTTTACACACAAGTCTCTTGCTAGTAGAAGGGTGAAGAGAGTGAGGAATGATACTAGCAATCCTATTGATGTTAAGGATGAGCTTGGATTGCTTCATCCAGCTTTCAAAGCTATCAAGCTCCCTTCTTCCTCTTCTTGA 1365 0.4674 MLERCLGTRRVRQIQRTCRHSTVTFLCLFLTFIVLRGTIGAGKFGTPEQDLYEIRHHLSAARTRRVLEESQPDNNNNNNNLNNYETFDLSKILVDEDPAGDDEKRDPHASYTLGPKISNWDEQREEWLRNNPGYPNFIGPNKPRVLLVTGSSPKPCENPVGDHYLVKSIKNKIDYCRVHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDSNFVMHGWNEMVYDEKNWIGLNTGSFLLRNCQWSLDLLDAWAPMGPKGKIRDEAGKLLTRELKNRPVFEADDQSAMVYLLATGREKWGDKVYLENGYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAYNFGDNQILQMYGFTHKSLASRRVKRVRNDTSNPIDVKDELGLLHPAFKAIKLPSSSS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01558 454 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 7 436 IPR008630 GO:0016020|GO:0016757
Rops11g01558 454 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 141 293 IPR029044 -
Rops11g01558 454 FunFam xyloglucan 6-xylosyltransferase 2 141 292 - -
Rops11g01558 454 Pfam galactosyl transferase GMA12/MNN10 family 142 381 IPR008630 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01558 Rops-Chr11 23764194 23765903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01558 1 453 Glycosyltransferase AT4G02500 79.050 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01558 K08238 - gmx:100818287 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01558 11 23764194 23765903 Rops11g01558 11 23764194 23765903 ECH