Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01548 ATGATTACGGATCAAATGGTCCAACTCATGCTGAAACAGGTTTCTGACAGGTCAACATACTATATATATGGTGGCAAGAGTGCACAGTTGTCAAAGACTCAAGGCTATGCCAGTTCCAGCTTGGAGTGGGAATTCCCTCTAATACTTCCAAGTTCTAAATTGACATTACAAGTACTCATGTTTGCAGGTATAGTGTACATTCTTGACACTATAGAGAATGAAAAAACAAGGAATGCTTTAAAGTTGAGATGTACCTCAAAGTTAAGGATTCAGAAGCAGGAGTTCTTTGAATTCTCTGAGCAATCAGTTGTATCCAATCTTTACTGGGGTATTGATAGCATTGAAGGTGCAATACAAGCAGAACAGCAAGAAGAAAGATCCTTCAGGCTAAAGAATGCAGAACAAATGCTTCAGGTTCCAGCAATGCTTGATGAGGAAGAGGTTACAGCTACAATTCCAAATAGTTACTTGGTTTGCTGCTCCTACTTTTACCTCTCAGTGGTTAGGAAACTTCAGGGAGATGAATGGCAGGCAGCACTGCATTTTCTTCAAGCTGTATTGGTCTCTCCTAAACTTGTTTGGACTGAATTTGCATCAGAACTTTGTGAAAGTCTTTTCCCTCAATCCAATATCTCCAAAAAGAAGGAAAACAATGGCAGTAGAAGATTGGAATCTGTTTCTCTTACAGCTTCTGCGGATGAAATCAATGAAGCAATTAGGGAGATGGCAAGGAGATACAAGGAAAGTTTGGTGTATTACCAGGTCATGCTTTATGGAGAGACTCCATGGTGGCGCAGTTATTGCAGCAAACAATCAGCACATTATATGGATGTACCAAATAGCAGCTGTGTATCTTCTACTTCAGTTCAACATGAACCAAAATTGAAAACTTGCAATATGTATGAGAAGGTTCACCCACTTGATCTTCAAGATGGGATGCATACAATGGAACAAGAGTCAAAACAATTCATGGATATTGCTGAATATGAAGGTCAGAAGAAATCCCTCAAACAATTGAATTCAGTTCAGTGTCACATCAAAGAGCACCAAAAAATTTCGACCATCAAATACGTCAAGGATAAGTTGAAAGAATCTAAAACACCAGCATCAGTAGATTCATGCCATGAGGATTTTAAAGATAAAAGGGACCTGGAAAATATGGATGAGACAAAATTTCATATAAGAACCACAATAACAACAGCAGATGATCTACAACCGGAAACATATGACTGGAAGCTACATCAATGCCCTGGTTTGCCTCAAGCTACTCAATGTCAAATGCAAGAACAGTTGGATGAAAGCAACATAATTAAGCTTGATTCTAGCAAATTCAACAGGTCCATAGAAGATGTCACTCTATCTTTCTCAAAATACAGAGATAAAACAAGAAATGCCCATTTAAATTGCCGTGTAGAAGATGAATTAATTGAGGAAACATTGCAGCCACTAAAATTCCATCTCTTTGATCATGCAACATTTTCATCTGCTAGCAAACATGGGCTCTGCCAGAAAAATCATGAAGAAAGTTATACGACGAAATCGCAAACATCATATTTCCTAGGAAACTTCAATGAAGTTTGTCCAAACTCCAGAAGATATTCCCTGCATGACCTGTCAGGACTACAATATTCAGAGGCATTAGGAAAATGTGGTGAAGAATATATTGTAGACATTGCATCCATTTTTGAGAGTTTGATTGGTTCATCAGGCACTACTTATGCTTCGTTAAAGGATGTGATTTTGGATGAACTGCTAATAGCTATCTCTACTTCCAAAGAGGAAAGAGAACTAAGGGCATCAGTATCCATTCTGACAACAATAATTTCAAGGAACAAATCGATTATTGAAGATGTCAAGAAGAAAGGTTTAAGGCTGTGTGACCTGGCAAGTGCTCTAAAACAAAATGTCCATGAGGCAGCAATTCTAATCTATTTAATAAATCCATCTCCTATAGATATAAAAACATTGGAACTTCTGCCAGTATTAGTGGAGATTGTATGCACTTCACATAGTTACAAGAGCAAGCAAGAGTCACTTCTTCTGACACCTCATGCAGCATCATTGATGATCATTGCAGAACTAGTAACTTCATTTGACTGTGCAACAAATAGCATGCATTTGGCTGCAATCAGTTCCCCTCATGTTCTCAATGGATTTCTAGAAGTTGCCAGAAATGATAATCTAGAAGAATTTTTCTCTTTGACCACCATTCTTATAAAATGCATGCAGTTTGATGCGCAGTGCAGAAAGTATGTGTCACAATTCACTCCTCTTGCTCCCTTTATCCACCTTCTACAGACGGAAAGCCCCCGTGCCAAATGCATGGCACTTGACTTCTTTCATGAAATCCTTTGTATACCACGATCATCAGCCATTAGTCTGCTGCAACGTATACAGCAAGAAAGAAGCATCAATATTATGCAGATACTAATGCATTGTGCCCATGAATTACAACCTGATCACCAGCTTTTAGCAGCTAACATGTTGCTTCAGTTAGACACATTGAACTCACCTGATAAAAGCTTGTTCAGAGAAGAAGCGGTTCAGATCCTTCTCAGGGCAATGACTTCTCAAGAAAGCTCAGAGCATATATTATCTGCATCTATTCTAGCAAATCTTGGTGGGACATATGCTTGGACAGGAGAACCATATACAGCAGCATGGTTGCTGAGAAAGACAGGCTTGACCTCTCCCTATCACCAGAATATGATGAGAAACTTCAACTGGTTGGATCAGAGTCTACAGGATACAAGGATAGATTTATGGTGCAGTAAAATTGCCAAATGTATCATAAGTGCTGGAGATTCCGTCTTCCACATTTTAGTGAGGGGGCTAAGAAGCAAGATAAAAAGGGTTTCTAGAGACTGCCTATTAGCCATTTCATGGCTTGGATGTCAAGTGTCAAAAAGCCCAGACAGCCTCAGTTATTCTGTTTCTGAGATTATACTAAGTGGAATTGAGCAATTTCTGCATCCTGGGATGGAGTTGGAAGAAAGACTTCTAGCATGTCTGTGCATGTTTAATTATGCCTCTGGGAAAGGAAAGCAAAAACTAATGCATGTCTCGGAAGGAGTAAAGGAATCACTAAGACGCCTTTCAAATATAACTTGGATGGCTGAGGAATTACACAAAGTAGCCGATTTCTTGCTGCCAAACATATCACGTATTTCTTGTGTTCACACACAAAACCTCGAGGCAGGTCGCAACTTCATCAGCATAGCTGTTTGTTCTCTCATATATTACAAGGGACTTCTATTCAGTGGATATTCAGATGGATCAATCAAGGTCTGGGATATTAGGGGGCACTCAGCCAGTCTTGTATGGGACATTAAAGAGCACAAGAAGTCTGTGACATGTTTTTCACTTTATGAACCATCGGACAGCCTTTTAAGTGGGTCCACTGATAAAACCATAAGGGTGTGGAAAATGATCCAGAGAAAGCTGGAATGTGTTGAAGTAATAGTCTTGAAGGAATCAATTCATCATTTACGTGCACATGGTGAAACAATTTTTGCAATTACTGAAAGCCAGGGAATAAAGCTTGTTAACGAATCAAGAGAGATCAGAGATATTTTCAAAGGGAAACATGTAAAGTGCATGACAGTAGCACAGGGAAAGTTGTATATTGGCTGTACAGATTCAAGCATACAGGAGTATTCCACAACATACAACCGGGAACTAGAAATCAAACCACCTACAAAGAGTTGGAGGAAGCAAAGTAAGCCCATCAATTCAATAGTAGCATATAGAGATTGGTTCTATAGTGCAAGTAAGCATGTTGAAGGCACAACATTCAAGGAATGGAAAAGAACTAGGAAACCCAAAATGTCAATACTTACTGACAAGGGAGATAACGTGGCGGCCATGGAAGTGGTAGAAGACTTCTTATACCTAGTCTCCAGAACATCAGCAAACAACATTCAGATATGGTTAAGAGGGACACCAAAAAAGTTGGGGAGAATATCAGCAGGAAGCAAGATAACAAGCATCCTTGCTGCCAATGACATTATTCTTTGTGGTACTGAGACAGGACTAATCAAGGGTTGGATCCCTCTGTAG 4059 0.3942 MITDQMVQLMLKQVSDRSTYYIYGGKSAQLSKTQGYASSSLEWEFPLILPSSKLTLQVLMFAGIVYILDTIENEKTRNALKLRCTSKLRIQKQEFFEFSEQSVVSNLYWGIDSIEGAIQAEQQEERSFRLKNAEQMLQVPAMLDEEEVTATIPNSYLVCCSYFYLSVVRKLQGDEWQAALHFLQAVLVSPKLVWTEFASELCESLFPQSNISKKKENNGSRRLESVSLTASADEINEAIREMARRYKESLVYYQVMLYGETPWWRSYCSKQSAHYMDVPNSSCVSSTSVQHEPKLKTCNMYEKVHPLDLQDGMHTMEQESKQFMDIAEYEGQKKSLKQLNSVQCHIKEHQKISTIKYVKDKLKESKTPASVDSCHEDFKDKRDLENMDETKFHIRTTITTADDLQPETYDWKLHQCPGLPQATQCQMQEQLDESNIIKLDSSKFNRSIEDVTLSFSKYRDKTRNAHLNCRVEDELIEETLQPLKFHLFDHATFSSASKHGLCQKNHEESYTTKSQTSYFLGNFNEVCPNSRRYSLHDLSGLQYSEALGKCGEEYIVDIASIFESLIGSSGTTYASLKDVILDELLIAISTSKEERELRASVSILTTIISRNKSIIEDVKKKGLRLCDLASALKQNVHEAAILIYLINPSPIDIKTLELLPVLVEIVCTSHSYKSKQESLLLTPHAASLMIIAELVTSFDCATNSMHLAAISSPHVLNGFLEVARNDNLEEFFSLTTILIKCMQFDAQCRKYVSQFTPLAPFIHLLQTESPRAKCMALDFFHEILCIPRSSAISLLQRIQQERSINIMQILMHCAHELQPDHQLLAANMLLQLDTLNSPDKSLFREEAVQILLRAMTSQESSEHILSASILANLGGTYAWTGEPYTAAWLLRKTGLTSPYHQNMMRNFNWLDQSLQDTRIDLWCSKIAKCIISAGDSVFHILVRGLRSKIKRVSRDCLLAISWLGCQVSKSPDSLSYSVSEIILSGIEQFLHPGMELEERLLACLCMFNYASGKGKQKLMHVSEGVKESLRRLSNITWMAEELHKVADFLLPNISRISCVHTQNLEAGRNFISIAVCSLIYYKGLLFSGYSDGSIKVWDIRGHSASLVWDIKEHKKSVTCFSLYEPSDSLLSGSTDKTIRVWKMIQRKLECVEVIVLKESIHHLRAHGETIFAITESQGIKLVNESREIRDIFKGKHVKCMTVAQGKLYIGCTDSSIQEYSTTYNRELEIKPPTKSWRKQSKPINSIVAYRDWFYSASKHVEGTTFKEWKRTRKPKMSILTDKGDNVAAMEVVEDFLYLVSRTSANNIQIWLRGTPKKLGRISAGSKITSILAANDIILCGTETGLIKGWIPL* 1353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01548 1352 Gene3D - 563 1053 IPR011989 -
Rops11g01548 1352 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1110 1143 - -
Rops11g01548 1352 ProSiteProfiles Trp-Asp (WD) repeats profile. 1110 1143 IPR001680 GO:0005515
Rops11g01548 1352 SUPERFAMILY WD40 repeat-like 1060 1348 IPR036322 GO:0005515
Rops11g01548 1352 SUPERFAMILY ARM repeat 702 1054 IPR016024 -
Rops11g01548 1352 Gene3D - 1054 1351 IPR015943 GO:0005515
Rops11g01548 1352 PANTHER OS04G0584500 PROTEIN 66 1050 - -
Rops11g01548 1352 SMART WD40_4 1057 1098 IPR001680 GO:0005515
Rops11g01548 1352 SMART WD40_4 1103 1142 IPR001680 GO:0005515
Rops11g01548 1352 Pfam WD domain, G-beta repeat 1108 1142 IPR001680 GO:0005515
Rops11g01548 1352 ProSiteProfiles Trp-Asp (WD) repeats profile. 1084 1107 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01548 Rops-Chr11 23586246 23596133 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01548 - - gmx:100782870 2130.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01548 11 23586246 23596133 Rops11g01548 11 23586246 23596133 ECH