Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01540 ATGAGTGAAGACACAAAGAAGCACATTGCCGGAGCTCTAACGGCGAGGCCTATTTCCGATGAACGGAAACCGTCACCGGCACCCGTCCCCACCAAGAAAATCATCATCAAGAGTGCCGACATGATGCCCGACATGCAAAAGGAAGCCGTTGATATTGCCGTCGCCGCGTTTGAGAAGTGCAATGTGGAGAAAGATGTTGCGGAGCAGATAAAGAAGGAGTTTGATAAGAGGCATGGCCCCACCTGGCATTGCATCGTTGGTCGTAATTTTGGCTCATATGTAACTCATGAAACAAACCACTTTGTTTATTTCTATTTGGATCAGAAAGCGGTTTTACTTTTTAAATCTGGCTAG 354 0.4661 MSEDTKKHIAGALTARPISDERKPSPAPVPTKKIIIKSADMMPDMQKEAVDIAVAAFEKCNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01540 117 CDD DLC-like_DYNLL1_DYNLL2 33 116 - -
Rops11g01540 117 FunFam Dynein light chain 29 117 - -
Rops11g01540 117 ProSitePatterns Dynein light chain type 1 signature. 83 97 IPR019763 GO:0005875|GO:0007017
Rops11g01540 117 MobiDBLite consensus disorder prediction 1 29 - -
Rops11g01540 117 PANTHER DYNEIN LIGHT CHAIN 32 117 IPR001372 GO:0007017|GO:0030286
Rops11g01540 117 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 30 117 IPR037177 GO:0007017|GO:0030286
Rops11g01540 117 Pfam Dynein light chain type 1 33 116 IPR001372 GO:0007017|GO:0030286
Rops11g01540 117 SMART Dynein_light_2 29 116 IPR001372 GO:0007017|GO:0030286
Rops11g01540 117 SUPERFAMILY DLC 28 117 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01540 Rops-Chr11 23481398 23485456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01540 K10418 - gmx:100805882 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01540 11 23481398 23485456 Rops11g01540 11 23481398 23485456 ECH