Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01537 ATGGAGTTCCTAACATGCACACTCATTCTCATTTCACTCTCTGCTCTCTCTTTCTTCCCATTATCTTGTTCTCAATATCCAACTTCAGATAGATCACAATTGCCCATATTCGCTTTCAGTTGGTGGGATGATAAGGGAACATTCATAGCCGGTGAAATGGCAGCCATTAAGGTCAAAGTACTTGAGAATGCTGATAAGATTGACAGAGATGCTTTTCAGCCCATACTCACCGTGAATGGGAAGGAAGGGAACAGTTCCTATGTATCTACGGTGTTGTTATATTTCGAAGGAAACTTTGATGATTGGAAGATTATATTCACCCCTATCCGGGTTGGATTGTTTAATGTACTCATCAATGAGGACCGTTATAAAGTTTATGATTCATCATTGCATTTCCAAGTTGAGCCAGGGAACATGTACCCATCTGTGTGTGTGGCATCATGGAAGGGCCTGAAATATGAGTTTGAAGCTGGTTCAAAAGCTACAATTATGGTGCTCCTTAAAGATGCATTTGGGAACGGTATATCTAAGACGACTGAAGTGTCCTATTTGCCTGATTTCAAGTTGTTTATGTTACATGAAAATGGTTCTATTGCTAGTGTGCCGGATATCTCCAACATGGGATGGAATGAGTTTGATTATATAGTTATTGAGTTTGTCATGACAAAAGCTGGAAACTTCTCCTTGATCATAGAAGGAGGGAATCAAACCTTGAATGGTTCTCCATTACCATTGAAAGTGAATCCAGGAACCATAAATGTCTCTAACTGTATTGCCAAATGGAACATTGAACCGCATGCATGGCAACTGGCTTCCAAGATGGAAATCTTTATACATCAGTTGGATCAATATGGAAATCTGGTTTCTGGACTGTATCCATTTGATGCTGAAGTTGTTGAAAGAGATACAAACTTGTCCATACCGATAGCAGATCTTCACTCTGAGGAAATGGATGCTGGAATTCAGTTGTTTTCTTTTAGCAATTTGGAACCAGGGAACTTCCTATTAACAATATATGATTCCAAGCATAATAAAAGCATTTCCAATATGCCATATGTTTATACTGTTTTTGTAGGTTATTGTGATGGGGTGACAAGTGTTGTTAATGGATCCGGTTTAAATGATTCAGTTGCTGGGGTAAGGGCAGATTTCTCAGTTTATTTGAATGACATCTATCAATATCCTTCTCCTGTTGAAGCACATATACTTCAAGTACAAATCTCAAGACAAAATGACACCTACAGTGTTTCACCAATCATATATCCTATGCTAAACAAAAATGGGAGCATAATAGCTTCAGGAGTGACATATGATGATATTGGTTACATGGAATCCGCCCCTTCACCTTCAATAGAGCAGAGCAACAATTCTAATGGGAGCAGGAACTCTGTAATAGCCAGTACTTTTCAAGTGGAATACACACCAGAAAAAAGTGGCTCTTATGATATTAATGTATATTGTGGAAACATATTATTGAATGAAGGCCATTCATTCAGAAAAGAGGTAAAAGCAGGTGAAGTAAATATTTCCTTGTCAAGTATTGTGAGGTTTTCTTCAAAGGTGCCAAAGCAGTCAAAAAATGAAATAGTAGTGCAGCTTATAGATTCATATTCAAACCCTGTTCTCTCACAACAATCAAGGTTGAAATTGGAGATTGCTTCACTTAATAGTTCTGGGTTTTCAACTTGGGACATTGTGGATAATAAGGATGGATCATACAGCTGCGGCTATATGACTAAAGATGTTGGCACTTACGAGATTTGTGCTTCCTTTGATGGCAAGCGTTTGGTGCCAAGTCCCCTCAGTATCAATGTGTACAGTAATGAATATTTTCCCAAAGCCAATGATGATAAAGTATCTATTTGGGAGGATGAATCCATTGCCATTGATCCCTTGGCAAATGATTATTTTGCTGGTGATAATGCAAGTATAGTTGAATTTTCAAAATCAAACCATGGTTCACTCATACACAATGGAAGGATCTTTCGCTACACTCCATACAAAGATTATTATGGAAATGATTCTTTTTGGTATACAATATCTGATATAAATGGAAATCTTGCTACTGCTTCTGTGTACATATCTGTTCTCAATATTCCACCTCAGTTTGCTTCTGTTCCAAGTCAACTGCAAGCAATTGAAGATTTTATAAGCCCTAGATTTGGTGGTTTCCCTGGGTTTGAGGTGACTTATTCAAATCCAACTGAGAATATTTCTGTCAATCTGAGTGCACAATCTGGAAGTATACTTCTGTCTCCTATGGTGGTGCAATTTGGGCAACCAATGTGGAGTGAACTTACAATTAATACAGGAAATGAAACTGCAACCAGTTTACTACTGGGAGGCTCATTGGAAGTAATTAATTTTGCGCTTCAGTCAATTCAATACCTGGGAAATGAGAATTTTTATGGTGCAGATACCATTCAAGTCTCTGCCAGGAATAAGGATGGAGAAAATTCAGTGGGTATTCCAATTTTTGTTGATCCTATCAATGACCCTCCATATATTAGAGCCCCTTACTTCATCATATTGAGGAGTAATGAAGATGAGACCCTTATCTTTGACAAAGAGAAAGACAAGTTTGACTTTTTCATTGGAGATCCTGATCTTCTTACCTTCCCTGGTGATCAGGCTCATTTTCTGGTGACATTTTCTATGGAAGTAAATGATGGATTTTTAGCAACAAATCTCCCAGTTCATTTGATCAATACAACTGAACTGAAGCACAGGAATAATTATCAGTGGCAGCCTCTTCAGACATATGTAACTATCTCAAAGCACTTTATGGTCAAAGCTAATGGAATCAGATTTCAGGGCACAGTCAATGACTGCAACAGTGTTATGCAGCAACTGTTCTATCATGGAGGTGAGCATGGAGCTGTATTAACATTGACATTGAATGACATGGGAAACTATGGGTGTTATCCAGATTGTGCAGAGGGGATGTCAATGTCATTATATACTGAGGCTGTGGTTAATTTAATGAGAAAGCAGCCAATGAGTTCATTTCTTGCTCACACCTTGGGATCAATCATTGTCATTGAATTTGTTATCATGTTCTCTCTTGGAGTGTTGCTTCTATACTTCACCTGCAAATGTGCAATTCTTCTGGTGTATGAAAGGAGAAACAATGAGAAAAAGTCTTCAGAGCTATCTAGTGTGCAAAGTTCCCAGAGACAAACTTCAAGCATAAACCTACTTGAGAATGAGAATGCTACTTATTTCACTGGTTGCTGTTCAAGTCCTTCATTGCTTCGTTTTGGCATGCAATCCTCCAATTTTCGCCAACGGTCCCGTCGTCAATTTCAAGTTGGAGAATCTAGCAATGCAGTGAATCAACCCTCTCCTTCAACCAGTGAGACCCAGAATATGGTTGTACCTAGTATCTCTACAACTCTTGCCTTTGAGAAAAACCATAGCTTAAACGTTTAA 3432 0.3837 MEFLTCTLILISLSALSFFPLSCSQYPTSDRSQLPIFAFSWWDDKGTFIAGEMAAIKVKVLENADKIDRDAFQPILTVNGKEGNSSYVSTVLLYFEGNFDDWKIIFTPIRVGLFNVLINEDRYKVYDSSLHFQVEPGNMYPSVCVASWKGLKYEFEAGSKATIMVLLKDAFGNGISKTTEVSYLPDFKLFMLHENGSIASVPDISNMGWNEFDYIVIEFVMTKAGNFSLIIEGGNQTLNGSPLPLKVNPGTINVSNCIAKWNIEPHAWQLASKMEIFIHQLDQYGNLVSGLYPFDAEVVERDTNLSIPIADLHSEEMDAGIQLFSFSNLEPGNFLLTIYDSKHNKSISNMPYVYTVFVGYCDGVTSVVNGSGLNDSVAGVRADFSVYLNDIYQYPSPVEAHILQVQISRQNDTYSVSPIIYPMLNKNGSIIASGVTYDDIGYMESAPSPSIEQSNNSNGSRNSVIASTFQVEYTPEKSGSYDINVYCGNILLNEGHSFRKEVKAGEVNISLSSIVRFSSKVPKQSKNEIVVQLIDSYSNPVLSQQSRLKLEIASLNSSGFSTWDIVDNKDGSYSCGYMTKDVGTYEICASFDGKRLVPSPLSINVYSNEYFPKANDDKVSIWEDESIAIDPLANDYFAGDNASIVEFSKSNHGSLIHNGRIFRYTPYKDYYGNDSFWYTISDINGNLATASVYISVLNIPPQFASVPSQLQAIEDFISPRFGGFPGFEVTYSNPTENISVNLSAQSGSILLSPMVVQFGQPMWSELTINTGNETATSLLLGGSLEVINFALQSIQYLGNENFYGADTIQVSARNKDGENSVGIPIFVDPINDPPYIRAPYFIILRSNEDETLIFDKEKDKFDFFIGDPDLLTFPGDQAHFLVTFSMEVNDGFLATNLPVHLINTTELKHRNNYQWQPLQTYVTISKHFMVKANGIRFQGTVNDCNSVMQQLFYHGGEHGAVLTLTLNDMGNYGCYPDCAEGMSMSLYTEAVVNLMRKQPMSSFLAHTLGSIIVIEFVIMFSLGVLLLYFTCKCAILLVYERRNNEKKSSELSSVQSSQRQTSSINLLENENATYFTGCCSSPSLLRFGMQSSNFRQRSRRQFQVGESSNAVNQPSPSTSETQNMVVPSISTTLAFEKNHSLNV* 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01537 1143 Pfam Cadherin-like domain 622 696 IPR041690 -
Rops11g01537 1143 PANTHER JITTERBUG, ISOFORM N 752 1111 IPR044801 GO:0030036|GO:0051015
Rops11g01537 1143 Gene3D Immunoglobulins 504 604 IPR013783 -
Rops11g01537 1143 Gene3D Immunoglobulins 138 248 IPR013783 -
Rops11g01537 1143 Gene3D - 605 693 - -
Rops11g01537 1143 ProSiteProfiles Filamin/ABP280 repeat profile. 358 502 IPR017868 -
Rops11g01537 1143 ProSiteProfiles Filamin/ABP280 repeat profile. 564 605 IPR017868 -
Rops11g01537 1143 Gene3D Immunoglobulins 361 503 IPR013783 -
Rops11g01537 1143 MobiDBLite consensus disorder prediction 1104 1124 - -
Rops11g01537 1143 SUPERFAMILY E set domains 525 608 IPR014756 -
Rops11g01537 1143 Pfam Filamin/ABP280 repeat 525 601 IPR017868 -
Rops11g01537 1143 Pfam Filamin/ABP280 repeat 360 489 IPR017868 -
Rops11g01537 1143 SUPERFAMILY E set domains 364 491 IPR014756 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01537 - - mtr:11416683 1791.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01537 11 23373668 23387562 Rops11g01537 11 23373668 23387562 ECH