Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01531 ATGGCGAGGACTACCTCTGACCTCATAGCTCAACTCAACCCAACTCTTGACTTCCCCCTCGATTCTCTTATCCACTATTGCACTTCCAATGTTTCTGGGTTCCCTCTTTCTCCCACTCATTTCACTCTCTCCCAGTTTGGGCATGGACAATCCAACCCAACGTACTTGATGGAAGTGGGTTCTCAAGGCTCTGTTGTGAAGCGTTATGTTCTGAGGAAGAAGCCTCCAGGGAAGTTGCTGGCTTCGGCTCATGCTGTAGACAGAGAATTTATGGTTCTCAAGGCGTTGGGCACTCATACTCAAGTTCCGGTTCCTAAAGTTTTTAGTTTGTGCAGTGATCCAAATGTTATTGGAACAGCATTTTATATCATGGAGTTTTTGGAGGGACGCATATTTATTGACCCCAAGCTACCGGGTGTGGCACCAGAGAGGAGGAGGGCAATTTACCGGGAAACTGCTAAAGCCTTAGCTTCCTTACATTCTGCTAATGTGGACTCCATTGGTCTGGGAAAATATGGTCGACGTAATGATTATTGCAAGAGACAGATTGAAAGGTGGGCTAAGCAATACATTGCCTCAACCAGTGAGGGTAAACCTGCAAGGAATCCAAAAATGTTTGCCCTGATTGATTGGCTACAGCATCAAATCCCTTCTGAAGATTCTTCAGGAGCAACAGCAGGTCTGGTTCATGGTGATTTTCGCATTGACAATCTTGTGTTCCATCCCACAGAGGATCGAGTAATCGGCATACTTGACTGGGAACTATCTACACTTGGTAACCAAATGTGTGATGTCGCATATAGCTGTATGCATTATATTGCAGATGTTGGGCATGCAACACTACAGGAAGGCCTGGAACGTTCTGGATTACCAGAGGGAATTCCTTCACTACCAGAATATTTGGCCGAATACTGCTCTCTGGCAGGAAGAAAATGGCCTGTTGCTGAATGGAAGTTTTATGTTGCCTTTTCTTTGTTCCGTGGGGCTTCAATTTATGCAGGAGTGTATAACAGATGGGTTAAGGGTAATGCATCAGGAGGTGAGCGTGCTCAACACACAGAAGTACTTGCTAATGGTCTTATAGATGCTGCTTGGGAATTTATTGAACGCAAATCTGTACTTCCTCAGCATCCTCCCTCAGATGCAAGTGCACAATACTATTCAAAAGAGTTAGTGAATGGGGACGATATGCAAGGCCACTTAAATCAGGGGAAGTTTGTCCCTAGTCAAAAGTCAGAATCACGTTGGACTATTCACCCAGCAGAGGAAAAGTTGAAGGAGATAGCAAAGAAAGAAGGCTTGTGGAACTTATGGATTCCTCGTGATAGTGCTGCAAGGGCAAAAACTCTTATTTTTGATGGGGGCAATAATGATCTCTCTACAGACGCAAATGACTTGTTATTGGGTGCTGGTCTAACAAATCTCGAATATGGATACCTTTGTGAGATCATGGGTCGATCTGTTTGGGCTCCACAAGTATTTAATTGTGGTGCACCTGACACAGGTAACATGGAGGTATTATTGCGCTATGGAAATAAAGAACAAATGCAACAATGGCTTGTTCCTTTGCTTGAGGGGAAGATTAGGTCTGGATTTGCAATGACAGAACCACGTGTGGCATCTTCTGATGCAACCAATATTGAGTGTTCTATCAAAAGGCAAGGAGATTCATATATTATCAATGGGACAAAATGGTGGACAAGCGGTGCTATGGATCCAAGATGCAGACTTCTTATAGTCATGGGGAAAACTGACTTCAATGCAGCAAAGCATAAACAGCAATCTATGATCTTAGTGGATATCCAGACTCATGGTGTTCACATAAAGAGACCATTGATGGTGTTTGGCTTTGATGACGCACCTCACGGGCATGCAGAAGTAATATTTGAGAATGTTTGTGTGCCAGCGAAAAATATCATACTGGGTGAAGGACGTGGATTTGAGATCGCTCAAGGTAGGCTAGGTCCTGGAAGGCTACACCATTGTATGAGACTGATTGGTGCTGCTGAGCGAGGCATGCATTTGATGGTTCAAAGAGCTGTTAGTAGAAGAGCATTTGGGAAATTGATTGCTCAACATGGCTCATTTCTTTCAGATATGGCCAAGTGCCGAATAGAGCTAGAGAAGACCAGATTGTTGGTGTTGGAAGCTGCTGACCAGCTTGATAGGCATGGGAACAAAAAAGCTAGAGGGATATTAGCAATGGCTAAGGTATCCGCACCTAACATGGCACTAAAGGTACTTGACATGGCGATGCAAGTGCATGGAGCAGCTGGTATATCGTCTGACACAGTCCTGGCACATCTATGGGCAACTGCAAGGACATTGAGAATTGCAGATGGTCCTGATGAAGTCCATTTGGGCACCATAGCCAAGTTAGAACTACAGAGAGCCAAGCTTTGA 2403 0.4449 MARTTSDLIAQLNPTLDFPLDSLIHYCTSNVSGFPLSPTHFTLSQFGHGQSNPTYLMEVGSQGSVVKRYVLRKKPPGKLLASAHAVDREFMVLKALGTHTQVPVPKVFSLCSDPNVIGTAFYIMEFLEGRIFIDPKLPGVAPERRRAIYRETAKALASLHSANVDSIGLGKYGRRNDYCKRQIERWAKQYIASTSEGKPARNPKMFALIDWLQHQIPSEDSSGATAGLVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCDVAYSCMHYIADVGHATLQEGLERSGLPEGIPSLPEYLAEYCSLAGRKWPVAEWKFYVAFSLFRGASIYAGVYNRWVKGNASGGERAQHTEVLANGLIDAAWEFIERKSVLPQHPPSDASAQYYSKELVNGDDMQGHLNQGKFVPSQKSESRWTIHPAEEKLKEIAKKEGLWNLWIPRDSAARAKTLIFDGGNNDLSTDANDLLLGAGLTNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVLLRYGNKEQMQQWLVPLLEGKIRSGFAMTEPRVASSDATNIECSIKRQGDSYIINGTKWWTSGAMDPRCRLLIVMGKTDFNAAKHKQQSMILVDIQTHGVHIKRPLMVFGFDDAPHGHAEVIFENVCVPAKNIILGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMHLMVQRAVSRRAFGKLIAQHGSFLSDMAKCRIELEKTRLLVLEAADQLDRHGNKKARGILAMAKVSAPNMALKVLDMAMQVHGAAGISSDTVLAHLWATARTLRIADGPDEVHLGTIAKLELQRAKL* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01531 800 SUPERFAMILY Protein kinase-like (PK-like) 39 343 IPR011009 -
Rops11g01531 800 Gene3D - 530 644 IPR046373 GO:0016627
Rops11g01531 800 FunFam Acyl-CoA dehydrogenase fadE12 530 648 - -
Rops11g01531 800 Pfam Acyl-CoA dehydrogenase, C-terminal domain 644 792 IPR009075 GO:0016627
Rops11g01531 800 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 642 796 IPR036250 GO:0016627
Rops11g01531 800 Gene3D - 645 799 - -
Rops11g01531 800 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 424 657 IPR009100 GO:0016627
Rops11g01531 800 Gene3D - 369 528 IPR037069 GO:0016627|GO:0050660
Rops11g01531 800 Pfam Acyl-CoA dehydrogenase, N-terminal domain 467 527 IPR013786 GO:0016627|GO:0050660
Rops11g01531 800 Gene3D Phosphorylase Kinase; domain 1 21 128 - -
Rops11g01531 800 Gene3D - 129 368 - -
Rops11g01531 800 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 81 797 - -
Rops11g01531 800 Pfam Phosphotransferase enzyme family 43 289 IPR002575 -
Rops11g01531 800 CDD ACAD10_11_N-like 42 308 IPR041726 -
Rops11g01531 800 Pfam Acyl-CoA dehydrogenase, middle domain 531 632 IPR006091 GO:0016627
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01531 1 798 Acyl Lipid Metabolism Gene Families AT3G06810 73.180 0.0 1245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01531 K00249 - gmx:100788184 1427.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01531 11 23295839 23309510 Rops11g01531 11 23295839 23309510 ECH