Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01529 ATGCAATCTTCCAGGTTTGATAGAGCTTCTTCCAGCTTGAGGGACAAAGTGCAAGATACCCTCTCTAGTTACCGCAATGAGCTGATCCCTCTTCTCTCCAGGTATGTTGCTAAGGGGAAAGGAATACTACAACCACATGACTTGCTGGACGAGGAAGCTATAATTCTACCTCCTTTTGTGTCTATAGCATTGCGTCCAAGACCTGGTGTCTGGGAGTATGTTCGTCTTAATGTCTTTGAACTCAATGTGGATAATCTAACTGTTGCAGAATATCTCCAATTCAAAGAAGAACTTGTAGATGGACAGTGCACTGACAATTATGTGCTTGAACTAGACTTTGAGCCATTTAATGCGTCATTCCCTCGACCAATTCGATCATCCTCTATTGGTAATGGAGTTCAATTTCTCAACCGTCATCTGTCATCATTCATGTTCCGTAACAAAGAAAGTTTGGACCCTCTCCCTGCATTTCTTCGTGGACACAAATATGATGGCCATGCAATGATGCTAAATGATCGCATACATAACATATCCAAGCTCCAGTCTTCCTTGGCAAAGGCAGAAGAACTCCTTTCTAAGCTCCCACCGAATACACCATATTCTGACTTTGAATACGAACTACAAGGATTGGGATTTGAGAGAGGTTGGGGAGATACAGCACAGAGTGTGTCAGAAATGGTGCATCTTCTACTAGATATCTTTCAGGCTCCTGATCCAAACACCTTGGAGACATTTCTAGGAAGAATTCCTATGGTGTTCAATGTCGTAATTGTATCACCACATGGTTACTTTGGCCAAGCAAATGTCTCAGGTTTGCCTGATACTGGTGGGCAGATTGTTTATATACTTGATCAAGTGCGTGCTTTAGAAAATGAGATGCTACTCAGAATTCAAAAGCAAGGACTTGATGTGGCTCCAAAAATTCTGATAGTTACTAGATTGATAGCAGAGGCAAAGGGGACCACATGCAATCAGAGACTGGAAAGAGTTAGTGGAACTGAGCACACATACATATTACGAGTACCTTTTAGAACTAAGAATGGAATTTTGAGAAAATGGATTTCAAGGTTTGACGTGTGGCCGTATCTAGAGACATTTGCAGAGGATGCATCAAATGAAATTGCTGCTGAGTTACAAGGAGTTCCAGATCTGATAATTGGCAACTACAGTGATGGAAATCTTGTTGCAACCTTATTATCTTATAAGCTAGGAATCACACAGTGTAACATAGCTCATCAATTGGAGAAGACTAAGTATCCAGATTCTGATATATATTGGAAAAAATATGAAGACAAGTACCATTTTACTTGTCAATTCACGGCCGACCTTATTGCAATGAACAATGCAGACTTCATAATCACTAGTACATATCAAGAAATTGCAGGGAGCAAGAATAATGTTGGACAATATGAGAGCCACACTGCCTTCACTCTTCCAGGACTGTATCGAGTTGTTCATGGAATTGATGTTTTTGATACCAAGTTTAATATCGTGTCTCCAGGTGCAGACATGTGCATATATTTTCCATATTCACAAAGAGAAAAGAGATTAACTTCTCTACATGGTTCCATTGAAAAATTGGTATATGGTGCTGAACAGAATGAAGAGCACATCAGTGGCTTGCTGAATGATAGATCAAAGCCCATTATCTTTTCTATGGCAAGACTTGATCGAGTGAAAAATATAACAGGGCTTGTTGAATGCTTTGGTAAAAGCTCCAAGCTGAGAGAGCTTGTGAATCTTGTGGTAGTTGGTGGTTACATTGATGTACATCAGTCTAGGGACAGAGAAGAGATGGGAGAGATAGAGAAAATGCATGGCCTAATAGGAAAATACAACTTGCATGGCCAGTTTCGTTGGATTAAAGCACAAATGAATCGTGCTCGTAATGGGGAACTCTACCGCAATATTGCTGATGTAAAAGGTGCTTTTGTGCAGCCTGCTTTTTATGAGGCTTTCGGCCTAACAGTTGTGGAAGCTATGACTTGTGGCCTTCCTACATTTGCCACTTGTCATGGTGGCCCTGCTGAGATAATTGAGCATGGCATTTCTGGATTCCATATTGATCCACATCACCCTGATCAGGTTGCTGAAATTCTAATAAACTTTTTTGAGCAATGTCAGCATGATCCTGGCCACTGGAGCAAGATTTCAGATGCAGGGGTTAGGGGCATACATGAGAGATATACATGGAAGATATACTCTGAGAGGTTACTGACTTTAGCTGGTGTTTATGGCTTTTGGAAGCATGTCTCCAAGCCTGAGAGGAGAGAAACTAGGCGGTACTTGGAGATGTTTTACATTCTCAAGTTCCGGGATTTGGTAAAATCAATCCCACTGGCAGTCAATTAG 2352 0.4107 MQSSRFDRASSSLRDKVQDTLSSYRNELIPLLSRYVAKGKGILQPHDLLDEEAIILPPFVSIALRPRPGVWEYVRLNVFELNVDNLTVAEYLQFKEELVDGQCTDNYVLELDFEPFNASFPRPIRSSSIGNGVQFLNRHLSSFMFRNKESLDPLPAFLRGHKYDGHAMMLNDRIHNISKLQSSLAKAEELLSKLPPNTPYSDFEYELQGLGFERGWGDTAQSVSEMVHLLLDIFQAPDPNTLETFLGRIPMVFNVVIVSPHGYFGQANVSGLPDTGGQIVYILDQVRALENEMLLRIQKQGLDVAPKILIVTRLIAEAKGTTCNQRLERVSGTEHTYILRVPFRTKNGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGITQCNIAHQLEKTKYPDSDIYWKKYEDKYHFTCQFTADLIAMNNADFIITSTYQEIAGSKNNVGQYESHTAFTLPGLYRVVHGIDVFDTKFNIVSPGADMCIYFPYSQREKRLTSLHGSIEKLVYGAEQNEEHISGLLNDRSKPIIFSMARLDRVKNITGLVECFGKSSKLRELVNLVVVGGYIDVHQSRDREEMGEIEKMHGLIGKYNLHGQFRWIKAQMNRARNGELYRNIADVKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGISGFHIDPHHPDQVAEILINFFEQCQHDPGHWSKISDAGVRGIHERYTWKIYSERLLTLAGVYGFWKHVSKPERRETRRYLEMFYILKFRDLVKSIPLAVN* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01529 783 Gene3D - 124 251 - -
Rops11g01529 783 FunFam Sucrose synthase 122 251 - -
Rops11g01529 783 Pfam Glycosyl transferases group 1 538 713 IPR001296 GO:0016757
Rops11g01529 783 Pfam Sucrose synthase 51 529 IPR000368 GO:0005985|GO:0016157
Rops11g01529 783 CDD GT4_sucrose_synthase 254 740 - -
Rops11g01529 783 PANTHER - 51 781 IPR012820 GO:0005985|GO:0016157
Rops11g01529 783 FunFam Sucrose synthase 503 731 - -
Rops11g01529 783 FunFam Sucrose synthase 3 368 494 - -
Rops11g01529 783 NCBIfam sucrose synthase 51 780 IPR012820 GO:0005985|GO:0016157
Rops11g01529 783 Gene3D Glycogen Phosphorylase B; 256 774 - -
Rops11g01529 783 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 271 740 - -
Rops11g01529 783 Gene3D - 12 51 - -
Rops11g01529 783 Gene3D - 52 121 - -
Rops11g01529 783 Gene3D Glycogen Phosphorylase B; 503 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01529 Rops-Chr11 23250313 23257480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01529 51 783 Glycosyltransferase AT5G49190 81.310 0.0 1272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01529 K00695 - gmx:100788717 1394.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01529 11 23250313 23257480 Rops11g01529 11 23250313 23257480 ECH