Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01518 ATGGCGGCGGGAACAATGGCGACGGCCGCAGGAGCGGCGGTGATGCTGTACTACGTGCTTAGCCGGAGACTGTCGAGGAAGGCGGAGGAGGAGGATCTCGACGGCGGCGATGTGTCGAAATCGAGCAGATCGGTTCGCCGGAGGAGGATTTCCCGGCGACCGGCTCAGGCGCCGGCGACCCTTTTGGAATCGATAATCACTTTGTCGGAGACTTTAAGGTTCACATATTCCGAGACCCTAGGAAAGTGGCCCATCGGTGATTTGGCCTTTGGGATCAACTATTTCATGCGCAAGCAGGGTAATTTGCCGGTTGCTAGTGTTTATGCGGGGAGTGATTGTGTGCAACTCAAGGGTGATGAAATTATTGTGGAGTTGTATGAGCTTTTGAGGTTGTTGACACTGTGCATACTTTTCTCCAAGAAGCCGTTTCCGGTGTTTTTAGATTCTGCTGGATTCACCCTGGATGATGTGCTCATACAGAAGCCTAAAGCTGCGCTTCTGAAGCCTGCTTTCACAATTATACGCGATACTCAGTCAAAATGTTTACTTCTATTGATCCGGGGTACACATAGCATGAAAGACACACTGACAGCTGCAACTGGTGCTGTTGTTCCCTTTCACCATTCAGTTTTAAATGATGGTGGGATAAGCAACTTGGTTTTAGGATATGCACACTGTGGTATGGTTGCTGCTGCTCGTTGGATTGCGAAGCTCTGCACTCCTACCCTACTTAAGGCTCTTGGTGAATGTCCAGACTTCAAAGTCAAGATTGTTGGGCACTCGCTTGGTGGTGGTACTGCTGCACTGTTAACATATATTCTTAGAGAGCAGAAAGAGTTCTCTTCAAGCACTTGTGTCACATTTGCCCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCCGGAAAGCACTTTATCACTACCATCATAAATGGTTCTGACTTGGTGCCCACATTCTCGACTTCCTCTATTGATGATCTCCGATCTGAGGTCACCGCATCCTCTTGGTTGAATGATTTACGGGATCAGGTTGAACATACAAAGGTCCTGAATGTTGTCTACCGCTCTGCAACCGCACTTGGATCTCGCCTACCATCTATATCTAGTGCAAAAGCTAGGGTAGCTGGTGCTGGTGCTATTTTGTGGCCAGTTACCAGTGGCACTCAGGTTGTGATGAAGCGTGCACAAAGTGTTGCTGAAGCTGTTGTCAGAACTCGATCATCGTTGTCATCATGGTCTTGCATGAGTGCCCGCCGCCGAAATGTTAGCTTATCACCGAATTCCAAAATTGAAGACTTAACTGAAGCTTCTCTATCTGAGAGAAGTACTGAATCTCTTTTGACCGAAGAGTTAGTAAGAGAGTCTGTGCATAAGGATGAACATAATTCCTCATGTGGAGGATCCGGCCATGACGACACAGATGAAGAGGAACAACTTATTCCTGCTAACCAAGACATTACTGCATCCACTGCAGATGACATCACCGAAGGCCAGTTATGGTATGAACTGGAGAAGGAGCTTCAAAAACAGGATGACACCATGAGCATTGATGCTCATGAAGAGGCTGCAGCAGCAAAAGAAATCACTGAAGAAGAGAATCAGCTTGTTGATGCTGCAGAATGCAGTAATTCAATCACAACATCTGACAACTTGGACAGCCATCGATTTTATCCCCCAGGCAGAATCATGCATATTGTCTCTATTCCTTCATCTGATGATTCAAATTCAAATTCCGATGATCCTGTAGAGGAACACGTCTGCTTATATGAAACACCTAGAGAGCTGTACAGCAAGCTTAGACTTTCAAGAACGATGATAAATGATCATTACATGCCAATGTATAAGAAGATGATGGAACTGTTAATCCGAGAACTAGAGAAAGATAGTAGCTCTAATATTTTAATGTGA 1908 0.4612 MAAGTMATAAGAAVMLYYVLSRRLSRKAEEEDLDGGDVSKSSRSVRRRRISRRPAQAPATLLESIITLSETLRFTYSETLGKWPIGDLAFGINYFMRKQGNLPVASVYAGSDCVQLKGDEIIVELYELLRLLTLCILFSKKPFPVFLDSAGFTLDDVLIQKPKAALLKPAFTIIRDTQSKCLLLLIRGTHSMKDTLTAATGAVVPFHHSVLNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALGECPDFKVKIVGHSLGGGTAALLTYILREQKEFSSSTCVTFAPAACMTWELAESGKHFITTIINGSDLVPTFSTSSIDDLRSEVTASSWLNDLRDQVEHTKVLNVVYRSATALGSRLPSISSAKARVAGAGAILWPVTSGTQVVMKRAQSVAEAVVRTRSSLSSWSCMSARRRNVSLSPNSKIEDLTEASLSERSTESLLTEELVRESVHKDEHNSSCGGSGHDDTDEEEQLIPANQDITASTADDITEGQLWYELEKELQKQDDTMSIDAHEEAAAAKEITEEENQLVDAAECSNSITTSDNLDSHRFYPPGRIMHIVSIPSSDDSNSNSDDPVEEHVCLYETPRELYSKLRLSRTMINDHYMPMYKKMMELLIRELEKDSSSNILM* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01518 635 Pfam Lipase 3 N-terminal region 49 123 IPR005592 GO:0016042
Rops11g01518 635 Pfam Lipase (class 3) 184 320 IPR002921 GO:0006629
Rops11g01518 635 MobiDBLite consensus disorder prediction 31 51 - -
Rops11g01518 635 MobiDBLite consensus disorder prediction 454 475 - -
Rops11g01518 635 CDD Lipase_3 175 326 - -
Rops11g01518 635 SUPERFAMILY alpha/beta-Hydrolases 155 322 IPR029058 -
Rops11g01518 635 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 6 630 - -
Rops11g01518 635 Gene3D alpha/beta hydrolase 151 356 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01518 Rops-Chr11 22819358 22824507 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01518 1 632 Acyl Lipid Metabolism Gene Families AT4G16070 65.865 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01518 - - gmx:100812454 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01518 11 22819358 22824507 Rops11g01518 11 22819358 22824507 ECH