Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01475 ATGTCTTCTTTCTTCGCGAGAACCCAGAGGTTCTCTTTGGCTGCTCTCCTCCTTCTATTGGGACTACTCACAATAAACCTTCGCATGACAGATGCTCAAATAGGCGTTTGTTATGGGATGATGGGAAACAATCTACCATCGCAAAACGAAGTTGTTGGTCTTTACAGATCAAACAACATCAGGAGAATGAGACTCTATGATCCAAACCAAGCTGCTCTACAAGCACTTAGAGATTCAGGCATTGAACTCATTTTGGGTGTGCCCAACTCCGACCTTCAAAGCCTTGCCACCAACGCTGATAACGCACGTCAATGGGTGCAAAGAAATGTGTTGAACTTCTGGCCTAGTGTCAAAATCAAGTACATAGCAGTTGGCAATGAAGTGAGTCCAGTTGGAGGCACCTCTGGGCTTGCCCAATATGTTCTACCAGCCGTCCAAAACATATACCAAGCTATAAGAGCCCAAAATCTTCATGATCAAATCAAGGTTTCAACAGCTATTGACACGACCCTAATAGGAAACTCCTTCCCCCCATCACAAGGTTCCTTTAGGGGTGATGTGAGGTCATACCTAGACCCTATCATAGGCTACTTGGTATATGCAGGTGCACCTTTACTAGTCAATGTTTACCCTTATTTTAGCTATGCTGGTAACCCACAAGAAATATCTCAATCCTATGCTCTTTTCACCTCCCCAAATGTTGTGGTTACGGATGGTCAATATGGGTACCAAAACCTGTTTGATGCTATGTTGGATTCGGTGCATGCAGCCATTGATAACACAGGGATTGGTTATGTGGAAGTTGTTGTATCAGAGAGTGGGTGGCCCTCTGAAGGAGGGACTGCAGCTTCATATGACAATGCACGTATTTACCTTGATAATTTGATTCGTCATGTTAGTAAAGGGACTCCAAGAAGGCCTTCCAAGCCTACGGAGACTTATATCTTTGGCATGTTTGATGAGAATCAGAAGAACCCAGAAATAGAGAAACATTTTGGGCTCTTCTATCCCAACAAGGAGAAAAAGTACCCATTTGGGTTTGGAGGAGAAAGGAACATGGAAATTGTCGATTATGGCTTCAATGCTACAGTTCCCCTTAAGAGTGACATGTAA 1113 0.4367 MSSFFARTQRFSLAALLLLLGLLTINLRMTDAQIGVCYGMMGNNLPSQNEVVGLYRSNNIRRMRLYDPNQAALQALRDSGIELILGVPNSDLQSLATNADNARQWVQRNVLNFWPSVKIKYIAVGNEVSPVGGTSGLAQYVLPAVQNIYQAIRAQNLHDQIKVSTAIDTTLIGNSFPPSQGSFRGDVRSYLDPIIGYLVYAGAPLLVNVYPYFSYAGNPQEISQSYALFTSPNVVVTDGQYGYQNLFDAMLDSVHAAIDNTGIGYVEVVVSESGWPSEGGTAASYDNARIYLDNLIRHVSKGTPRRPSKPTETYIFGMFDENQKNPEIEKHFGLFYPNKEKKYPFGFGGERNMEIVDYGFNATVPLKSDM* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01475 370 ProSitePatterns Glycosyl hydrolases family 17 signature. 266 279 IPR000490 GO:0004553|GO:0005975
Rops11g01475 370 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 347 IPR044965 GO:0004553|GO:0005975
Rops11g01475 370 FunFam glucan endo-1,3-beta-glucosidase, basic 34 347 - -
Rops11g01475 370 Gene3D Glycosidases 33 348 - -
Rops11g01475 370 Pfam Glycosyl hydrolases family 17 34 345 IPR000490 GO:0004553|GO:0005975
Rops11g01475 370 SUPERFAMILY (Trans)glycosidases 34 346 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01475 Rops-Chr11 22248573 22250350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01475 40 357 Glycoside Hydrolase AT4G16260 63.125 1.41e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01475 - - ccaj:109791097 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01475 11 22248573 22250350 Rops11g01475 11 22248573 22250350 ECH