Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01468 ATGGCGGACAAGTACAACCTCAAGAACCCCGCCGTGAAGCGGATCCTCCAGGAGGTCAAGGAGATGCAATCTAACCCTTCCGATGATTTCATGAGCCTCCCTCTTGAGGAAAATATATTTGAATGGCAATTTGCGATTAGAGGGCCTCGTGATACTGAATTTGAGGGTGGTATTTATCATGGACGTATCCAGTTGCCATCAGAGTATCCCTTCAAACCTCCTTCATTTATGCTCTTGACACCAAATGGTCGTTTTGAGACCCAAACCAAGATTTGCTTGAGCATATCAAATCACCACCCTGAGCATTGGCAACCATCATGGAGCGTAAGGACTGCTTTAGTTGCACTGATTGCATTCATGCCTACCAACCCAAATGGTGCATTAGGCTCATTAGACTACAAGAAAGAAGAGAGGCGTACCTTGGCCATCAAATCTCGTGAAGCACCTCCAAAATTCGGGACACCTGAACGTCAAAGGGTGATTGATGAGATACATGAGTATATGCTGAGCAAGGCACCTCCTGTTCCTCAACTTAGCTCAACACAGGCTCCTGAAGAACACCCCACAAATGAGGAGGCTGAGAACCAGGTTGATTCACCTAATCCTGAGGCTTTACCTGCAGAAGACGGAATTCCAGATCATGCAGGTGATGAAATTGTTGAAGAACAAGTCCCTGCAAATGTTAATCCTGCAGGAGCTGAAGCTTCAAGGGAGATTCAATCAAGTGTTTCAAGAAATCAGTTATACCAAAACTCAGATACAAGGGTTCAAAATCCTAAGCCAGAGACAAGGGTCCAAAAACCTGATGATCGATTGTTTACATGGGCAGCTATTGGACTTAGTATTGCAATTGTGGTCCTTTTACTAAAGAAGTTCATCAAATCTACCGAACATGGTGCAGTTTTCTTTGATGGATCTTAG 921 0.4441 MADKYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPRDTEFEGGIYHGRIQLPSEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRTLAIKSREAPPKFGTPERQRVIDEIHEYMLSKAPPVPQLSSTQAPEEHPTNEEAENQVDSPNPEALPAEDGIPDHAGDEIVEEQVPANVNPAGAEASREIQSSVSRNQLYQNSDTRVQNPKPETRVQKPDDRLFTWAAIGLSIAIVVLLLKKFIKSTEHGAVFFDGS* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01468 306 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 10 131 - -
Rops11g01468 306 MobiDBLite consensus disorder prediction 241 259 - -
Rops11g01468 306 MobiDBLite consensus disorder prediction 172 213 - -
Rops11g01468 306 CDD UBCc 12 151 IPR000608 -
Rops11g01468 306 FunFam ubiquitin-conjugating enzyme E2 32 1 174 - -
Rops11g01468 306 MobiDBLite consensus disorder prediction 241 265 - -
Rops11g01468 306 Gene3D Ubiquitin Conjugating Enzyme 2 175 IPR016135 -
Rops11g01468 306 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 165 IPR000608 -
Rops11g01468 306 SMART ubc_7 13 173 - -
Rops11g01468 306 Pfam Ubiquitin-conjugating enzyme 14 125 IPR000608 -
Rops11g01468 306 SUPERFAMILY UBC-like 11 133 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01468 Rops-Chr11 22040533 22043594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01468 1 304 Miscellaneous Gene Families AT3G17000 64.103 3.16e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01468 K10578 - gmx:100798396 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01468 11 22040533 22043594 Rops11g01468 11 22040533 22043594 ECH