Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01460 ATGGCAGGTGCTAGCTCTAGGAGATTGGGCGTGGCAGTGGATTTCTCACCATGCAGCATCAAAGCACTGAAATGGACGGTGGATAACATTGCCAGGGAAGGGGATCACCTCATTCTCGTTATCATTCGCCCCGCTGAGTACTACGAACACGGCGAGATGCAGCTCTGGGAAGCTACTGGCTCACCTCTCATACCTCTGGCTGAGTTCTCTGACCCTGCGCTCTTGAAGAGATATGGATTGAAACTGGTACCCGAAGTAATTGATATTGTCACACCTGCCTCGAAGCAGAAAAATATTCAGGTACTAATGAAGATCTTTTGGGGTGATGCTCGTGAGAAGTTATGTGAAGCAATTGATCACATACCTCTAGACAACCTTACCATGGGGAATAGAGGCCTTGGCACCCTCCAAAGGGCTGTAATGGGCAGTGTAAGCAACTATGTGGTGAATCACGCCTCCTGTCCCGTCACCGTGGTGAAGAGTACAGATCAGCGCCATTAA 501 0.495 MAGASSRRLGVAVDFSPCSIKALKWTVDNIAREGDHLILVIIRPAEYYEHGEMQLWEATGSPLIPLAEFSDPALLKRYGLKLVPEVIDIVTPASKQKNIQVLMKIFWGDAREKLCEAIDHIPLDNLTMGNRGLGTLQRAVMGSVSNYVVNHASCPVTVVKSTDQRH* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01460 166 Pfam Universal stress protein family 7 160 IPR006016 -
Rops11g01460 166 CDD USP_Like 8 159 - -
Rops11g01460 166 Gene3D HUPs 2 166 IPR014729 -
Rops11g01460 166 PANTHER IMP2'P 6 164 - -
Rops11g01460 166 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 161 - -
Rops11g01460 166 PRINTS Universal stress protein signature 138 160 IPR006015 -
Rops11g01460 166 PRINTS Universal stress protein signature 120 132 IPR006015 -
Rops11g01460 166 PRINTS Universal stress protein signature 6 24 IPR006015 -
Rops11g01460 166 FunFam Universal stress protein family protein 3 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01460 Rops-Chr11 21878217 21880234 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01460 - - gmx:100816534 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01460 11 21878217 21880234 Rops11g01460 11 21878217 21880234 ECH