Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01456 ATGGCTCTGAGATATTTCTGCGCCACAAATATCTCCACTCAACACCATGCGAAAGTGGAGTTGAGAAACAGCAAGAAGAATCTTCAGAATGTGAAGAGCTTGGTGAACACTGTGGGGCTTCCTTCCATTTCATCAACTCCACTTGAATCTCTCCAGAGAGGAAACTGGGTCAAACTCATTTGTGGTGCAAGCTTTGAGGATGTTGTTGATATCAGAAATCTCAGTCTGATTTACACTCTTGCTGGAGTTGACTGCATTGACTGTGCTGCCGATGCATCGGTTGTCAGCGCTGTGAATGAAGGAATTGAAGCTGCAAGAGATATCTTATGCCTTCGAAGGCCGTGGGTGATGATCAGTGTCAATGATGACAAAGATCTTCACTTTCGTAAGGCTGAATTTGATCCAGAGGACTGTCCAGCAGACTGTTCACGGCCTTGTGAAAAAGTGTGCCCTGCTAATGCAATATCATTCCAAGGGAAATCTACTTCAGGAATTTCATATAAAACAGAAGTACCAAGAGCACTCAAGGATGGAGTCATCACAGAACGCTGCTATGGCTGTGGTCGCTGTCTTCCAGTTTGCCCTTATGATAAAATAAGAGAGGTAACATATGTAAGAGATGCAATTACAACTGCTGATCTCATCAAGAGAAACGATGTTGATGCTATAGAGATACATACAAGTGGGAGGCAAAGTACACTGTTTAAAGAACTCTGGTGTGCTCTAGGAGATTCAGTAAGAAATTTGAGGCTAATAGCAGTTAGCTTACCTAATGGTGGGGAATCAACAATATCCTCTATGAACAAAATGTTCTCTATTATGAAACCCAATCTTCAAAGCTTCAACTTATGGCAGTTAGATGGCCGTCCCATGAGTGGAGATATTGGGAGAGGAGCAACTAAGGAATCCATTGCCTTTGCTGTTCAATTGGCTAAAGCAGAAAAAAGACCTCCTGGTTTTCTTCAACTTGCTGGTGGAACTAATGCTCACACAATTGATGGTTTAAAGAAAGAGGGACTCTTTCAAACAACTATTACCGAGTACTTAAATGATGAAACATCAACAATCAGCTCATCTGATTCATCACATGCTTTAATTAGCGGTATAGCTTATGGTGGCTACGCACGGAAGATTGTTGGTAGAGTATTGCAATCCATGCAATCCCAACATGGTGGAGCTGCTTCAATTGAGGACCATCCTGAGCATCTGTTGATGGCTCTAAGGGAAGCACTTGCTTTGGTTGGACCTGTTAAATGTTACAGCGTATAA 1269 0.4232 MALRYFCATNISTQHHAKVELRNSKKNLQNVKSLVNTVGLPSISSTPLESLQRGNWVKLICGASFEDVVDIRNLSLIYTLAGVDCIDCAADASVVSAVNEGIEAARDILCLRRPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCEKVCPANAISFQGKSTSGISYKTEVPRALKDGVITERCYGCGRCLPVCPYDKIREVTYVRDAITTADLIKRNDVDAIEIHTSGRQSTLFKELWCALGDSVRNLRLIAVSLPNGGESTISSMNKMFSIMKPNLQSFNLWQLDGRPMSGDIGRGATKESIAFAVQLAKAEKRPPGFLQLAGGTNAHTIDGLKKEGLFQTTITEYLNDETSTISSSDSSHALISGIAYGGYARKIVGRVLQSMQSQHGGAASIEDHPEHLLMALREALALVGPVKCYSV* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01456 422 Gene3D - 123 236 - -
Rops11g01456 422 SUPERFAMILY 4Fe-4S ferredoxins 119 209 - -
Rops11g01456 422 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 175 204 IPR017896 -
Rops11g01456 422 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 184 195 IPR017900 -
Rops11g01456 422 Pfam Iron-Sulfur binding protein C terminal 214 415 IPR021039 -
Rops11g01456 422 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 129 160 IPR017896 -
Rops11g01456 422 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER-RELATED 50 213 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01456 - - gmx:100804088 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01456 11 21787431 21793260 Rops11g01456 11 21787431 21793260 ECH