Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01420 ATGGCTCGGAAGGGTAATCAACAGAAGAATGGGTTGAACCCCAGAAAAGGGGTTTCTGGGGGTGTCCTTCCGGGGATGAAAGGTCATGCTAACGGAGGGTCTGTGAAGGTTTTTCCTGGAGAGGAACTCGCAAATGGCGACCGGCAGACTCAGAATCCTTGTGAAGCTAGTTCTGCTGGTGATGACAATATCAATGAGCAAAAATCTGAGAAGTTTTCTAGGAAAGAAAAGCAAGGTATGGCTGCAAAGCATGGCCTGGAGGAGTCATTGCCCTTTGGGTGTAATTCAGGGAATGACATTCTTAATCCTGAAATTTCAATACAGGAAGAAAATGGGACTTTACCTAGAAGTAATCAAGGTCAACAGAGTATGAAGAGTAGATTGAGCCATTTACTGGAAGGTTTGCACATCAACAGTATGGTAGAAAATATAGAGCTCGCTGATAATGTAATGATTAGGAGATTAAGGTTGTCCGCATTATCCATTTTTACAGCAGTTACTGAGTGGCTAACCAGGCAGCAGCCATTGTTTGTATCTCTTAGAACCATCAGTTTAAAAGCTTGTGATAAGCTTAGAACAAGAATTGAGCAGGCATATCCCATTGTTCTGAAGTGGCTCATGCATTTTGCGAACATAATGCTCCTATTATCAGTGTTTTGGTTGGATTGTGCCTTCCGGGGCATTGATTCATTTGTACGAATGGGTACAACATCCTTCTTCTCTGTTATATTATGCAGCGTATTCTCGGTGATTAGTATGATAGGGATGCTCAGGTTTCTCGTTGTCCTGGGCCTGGCTGCCTCGATTGGATATTTTGTTGGGCTCATGCTTGCAGTTTTGGTAGTTGCAATCCTTGGAGTTGTTACCTTGTGGTTTTATGGTAGCTTTTGGACAACGGGATTTTTCATCTTCCTTGGAGGATTGGCATTTATGTTAAGTCATGAACGTCTAGCACTACTTATCACCACTGTGTATTCTGTATATTGTGCTTGGCTGTACGTTGGGTGGCTGGGTTTGCTATTGGCTTTCAATTTAGCATTTATCTCAAGTGATGTTCTGATATACTTCCTCAAGAGAAACATAGATCAACAGAGTAGATCCAATCCTTTTGAGCAAAGAGCTGGAATGCATGGCCAACCAGGTTTTGGAAATGATGAACCAATGCAGGCTTCTTCCTCTGAAAATGGACCAGGACAATCTGCAGATCGTAATGCTGGAGTCCCTTCAACAAGTGGGGTTGATTCTGATGTAACTTCTGAAGATGAAGTTGTCCGATTGTTGAACTGCTCTGATCACTATGCAGCACTGGGCTTGACGCGTTATCAAAATATAGATGTTTCAATACTGAAGCGGGAATATAGGAAGAAGGCAATGTTAGTACATCCTGATAAAAATATGGGTAATGAAAAGGCTGCTGAAGCCTTTAAGAAACTTCAAAATGCATATGAGATTCTAATGGATTCTTTGAAGCGAAAAGCTTATGATGATGAGCTTAGGAGAGAAGAGCTGTTGAGTGTATTTCACAGATTTCATAATGCTTCCCATAAGAATGGTAGGCATGGATTCTTTCCTTCAGGACTTGCACGATCAGATGCAGATGGTGAGGACCCATTTGGTGATTCTAGGCGAATAGCTTGTAAAAGGTGTGGTGGCTTTCATGTCTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGCCAAGATTTTCATCAAGCCAAGGATGGTGATGGATGGGTTGAACAATCTTCCCAACCATTTCTTTTTGGCTTATTGCAGAAGGTTGATGCTCCTTCTGCTTACGTGTGTGCTGATAGCAGAATATATAATGCCACTGAATGGTATATCTGTCAGGGTATGAGATGTCCAGCAAATACTCATAAACCAAGTTTTCATGTGAACACCAGTTTAATGTCCAAGAATAATTCCGGCAAAGGATCTAGTCCAGGTCAAAGAGGTGGGCGTATGCCAACACCTAACATGGAAGAAACCATGACTGAGGAAGAATTCTTTGAGTGGTTACAGAATGCAGTACAGGCAGGCGTGTTTGACAATTTTAGTGGCAACACTGCAACAGAGAGCCCATCTGCCAAATCTGGAAATGGGATGAAAAATCCTGGCAGTGGTGGTGCTAGTGGCAGTGGTAGTGGCAGCAAGAAAAAGAAAAAGGGAAAGAAGCAATGGTGA 2199 0.4256 MARKGNQQKNGLNPRKGVSGGVLPGMKGHANGGSVKVFPGEELANGDRQTQNPCEASSAGDDNINEQKSEKFSRKEKQGMAAKHGLEESLPFGCNSGNDILNPEISIQEENGTLPRSNQGQQSMKSRLSHLLEGLHINSMVENIELADNVMIRRLRLSALSIFTAVTEWLTRQQPLFVSLRTISLKACDKLRTRIEQAYPIVLKWLMHFANIMLLLSVFWLDCAFRGIDSFVRMGTTSFFSVILCSVFSVISMIGMLRFLVVLGLAASIGYFVGLMLAVLVVAILGVVTLWFYGSFWTTGFFIFLGGLAFMLSHERLALLITTVYSVYCAWLYVGWLGLLLAFNLAFISSDVLIYFLKRNIDQQSRSNPFEQRAGMHGQPGFGNDEPMQASSSENGPGQSADRNAGVPSTSGVDSDVTSEDEVVRLLNCSDHYAALGLTRYQNIDVSILKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREELLSVFHRFHNASHKNGRHGFFPSGLARSDADGEDPFGDSRRIACKRCGGFHVWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDAPSAYVCADSRIYNATEWYICQGMRCPANTHKPSFHVNTSLMSKNNSGKGSSPGQRGGRMPTPNMEETMTEEEFFEWLQNAVQAGVFDNFSGNTATESPSAKSGNGMKNPGSGGASGSGSGSKKKKKGKKQW* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01420 732 SUPERFAMILY Chaperone J-domain 426 507 IPR036869 -
Rops11g01420 732 MobiDBLite consensus disorder prediction 385 417 - -
Rops11g01420 732 Gene3D DnaJ domain 419 512 IPR036869 -
Rops11g01420 732 MobiDBLite consensus disorder prediction 637 664 - -
Rops11g01420 732 MobiDBLite consensus disorder prediction 45 63 - -
Rops11g01420 732 MobiDBLite consensus disorder prediction 689 732 - -
Rops11g01420 732 CDD DnaJ 431 487 IPR001623 -
Rops11g01420 732 PANTHER OS03G0832900 PROTEIN 1 732 - -
Rops11g01420 732 ProSitePatterns Nt-dnaJ domain signature. 475 494 IPR018253 -
Rops11g01420 732 MobiDBLite consensus disorder prediction 367 417 - -
Rops11g01420 732 MobiDBLite consensus disorder prediction 689 719 - -
Rops11g01420 732 MobiDBLite consensus disorder prediction 1 90 - -
Rops11g01420 732 ProSiteProfiles dnaJ domain profile. 431 498 IPR001623 -
Rops11g01420 732 Pfam Cleavage inducing molecular chaperone 541 638 IPR032843 -
Rops11g01420 732 PRINTS DnaJ domain signature 470 490 IPR001623 -
Rops11g01420 732 PRINTS DnaJ domain signature 453 468 IPR001623 -
Rops11g01420 732 MobiDBLite consensus disorder prediction 637 653 - -
Rops11g01420 732 MobiDBLite consensus disorder prediction 64 83 - -
Rops11g01420 732 Pfam DnaJ domain 431 495 IPR001623 -
Rops11g01420 732 SMART dnaj_3 430 490 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01420 Rops-Chr11 21085746 21091205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01420 1 693 Miscellaneous Gene Families AT5G49580 53.067 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01420 K09534 - gmx:100789594 1137.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01420 11 21085746 21091205 Rops11g01420 11 21085746 21091205 ECH