Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01419 ATGGATAATAATACAAGAGGAGATGGGATTTTCCCGGATGAGGTAGTTATTCAGATTCTTGCAAGGTTACCTGTGAAATCCCTTTTTAGGAGCAAAACCGTGTGCAAATTGTGGTATAGGTTGTCTTTGGATAAGTATTTCATTCAACTCTACAATGAGGTTTCTAGGAAGAACCCCATGATTCTGGTGGATATTTCAGATTCATCAGAGTCCAAATCTAGCTTAATCTGTGTTGATAATTTAAGGGGTGTCTCTGAATTTTCACTCAACTTCTTGAATGATAGAGTCAAGGTTAGAGCATCTTGTAATGGCTTGTTGTGTTGCTCTAGTATTCCTGATAAGGGTGTGTTCTATGTTTGCAATCCTGTAACTCGTGAGTTCAGGTTGCTTCCTAAGAGTAGGGAAAGGCCTGTGACTCGGTTTTATCCTGACGGTGAAGCTACCTTGGTTGGATTGGCCTGTGATTCGGCATGTCAGAAGTTTAATGTTGTTCTTGCGGGTTGCCATCGCACTTTTGGTCATAGGCCAGATGGAAGTTTCATATGTTTGGTTTTTGATTCAGAGTTGAACAAGTGGAGGAAGTTCATTTCTTTTCAAGATGACCATTTTACTCATATGAATAAGAACCAAGTTGTTTTTGTCAATAATGCTTTGCATTGGTTGACTGTTAGCTCTAGTTACATTCTTGTGCTTGACTTAAGTTGTGACATTTGGAGGAAGATGCCACTACCGTATGACTTGATTTATGGAATGGGAAATAGGATTTATCTCTTAGACTTCGATGGCTGCTTGTCTGTTATCCAAATTTCGGAAGCATGGATGAACATATGGGTGCTGAAAGATTACTGGAAAGATGAATGGTGTATGGTGGATAAGGTGAGTCTGAGGTGTATCAGAGGAATGGTACCAGGCATTTTCCCAATCAGTCAGACAGGTGAACATGTTTTCTTGGCAACTCATAAGCAGGTTTTGGTGTATCATCGCAAGAGTCAAGTTTGGAAAGAAATGTACTCTGTGAAGTATAGCTCAACACTCCCATTATGGTTTTCAGCACATGCATATCGCAGCACAATGTTCTCTTGTAACTGA 1089 0.4004 MDNNTRGDGIFPDEVVIQILARLPVKSLFRSKTVCKLWYRLSLDKYFIQLYNEVSRKNPMILVDISDSSESKSSLICVDNLRGVSEFSLNFLNDRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREFRLLPKSRERPVTRFYPDGEATLVGLACDSACQKFNVVLAGCHRTFGHRPDGSFICLVFDSELNKWRKFISFQDDHFTHMNKNQVVFVNNALHWLTVSSSYILVLDLSCDIWRKMPLPYDLIYGMGNRIYLLDFDGCLSVIQISEAWMNIWVLKDYWKDEWCMVDKVSLRCIRGMVPGIFPISQTGEHVFLATHKQVLVYHRKSQVWKEMYSVKYSSTLPLWFSAHAYRSTMFSCN* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01419 362 ProSiteProfiles F-box domain profile. 11 54 IPR001810 GO:0005515
Rops11g01419 362 CDD F-box_AtFBW1-like 11 47 - -
Rops11g01419 362 NCBIfam F-box protein interaction domain 101 327 IPR017451 -
Rops11g01419 362 PANTHER BNACNNG10540D PROTEIN 11 340 - -
Rops11g01419 362 Gene3D - 11 47 - -
Rops11g01419 362 SMART fbox_2 11 51 IPR001810 GO:0005515
Rops11g01419 362 Pfam F-box-like 12 45 IPR001810 GO:0005515
Rops11g01419 362 SUPERFAMILY F-box domain 11 80 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01419 Rops-Chr11 21076834 21078446 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01419 - - gmx:100811223 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01419 11 21076834 21078446 Rops11g01419 11 21076834 21078446 ECH