Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01178 ATGAGCTTCAGAAACCGAGATCATCCCCAGAAGGAAATGACGGAATCTCCAAGAGGAGAGGTTGGAGAGATTGACACAAGGGCGCCATTCCAATCCGTCAAAGCTGCTGTTAGTTTATTTGGTGAAGTAGCTGTCTCAAAGGAAAAACGTGCTGTCAAGAGAAGATCATCAGAGAATGTATTGGAAAAGGAGACTCAACTTCTCTTGGTCCAAAGAGAATTGAACAAGATAAAGAAACAGCTGGACAGTGCCGAGAATACAAAAGCTAAAGCACATTCTGAGCTTGATAAGGCCAATGTGACACTTCAGGAATTGACAAAGAAGCTCAACAGTGTGAGAGAATCAAAGCAATCAGCAATGGAAGCAGCTGAAGATGTGAAGAATCAGGCCAAAGAACTAGAAAAGGCACTATCCCAGAAAGCTATTGGATATGAAGCTTGGAAACAAGAACTAGAGCATGCAAGAAAGGAATACACTACAACTGTGAAAGAATTAGATGCTTCCAAGCAAGAACTCAACAAAATCAGGCAGGATTTTGATGCAGCTTTGGAGGCAAAATTGACTGCATTCCAGACAGCAGGAGAAGCTCAACGTTCAGCAAAATTGAACTCAGAAAAGGTCAATGAACTCTCAAAGGACATTGCAACCATGAAAGCATCAATTGAACAATTGAAGCTTGCCACTGCACAAGCCCAAGAAGAACAAGCTAAGGTCATGGGAGAAAGAGAAGCCCAACTAAGTTATTACAAAACTGCTAAGGAAGAAGCACAGATGAAAATGGCAGCTTTGAAGAATGAGTATGACCCTGAACTAACACTAAGTCTAGAGGCCAAACTTGCTGAAACAAGTGCAGAGATTCAGGCTCTTCAAGAGCAGATGAAACAGGCTCATGCTTCTGAGATGGATTCTGTGAGACTAATAACTTTGGAGATTAAAGAAGCCACAAAGACATTGCAGGAAGTTTCTGAAGAAGAAAGCTCCCTTAAAAACTTGGAGGCTTCCCTTAGGACAGAATTAGAACAAGTGAAGAAAGAGCAAGATGAACTTAAGGAAAAGGAACAGGCAGCTGAAGCTCTTGCTGCTAACCTAACTGGTGAGCTACAAAGTAGCAAGGAAGAGGAAGAGGCAGGTTCTGTGGAGGACAAAGTATCTGATGTCGTTGATGAGATGAACATGAAAATTAAGCAGTTGTCATCTGAGACAGAAAATGCAAAAAGAGAAGAAAAAGAAATGAGAACAAAAAGTCAAGAGCTGAAGCAAGAAGCTGAAAAATCCAGAGCTGTGGCTGAAGATTTAGAGCAAAAGCTAGATGTTATCCTAAAACAAGCTGAAGAAGCAAAAGCAGCAGAACAAAAAGCCATTGAGGAGATGAAGTTGTTGTCTGACGCACAAGGTAGAGTCTCAGTTTCAGATTCCAATGGTAAGATCATATTGACAGTTGATGAGTTTGCGGCTTTGAGTGGAAAAATCAAGGAATCTGAAGATTTAATTGAGAGAACAGAAGCAGCAGCCATGGCTCAAGTGGAAGCAATCAACACAAGAAAAACCGAAGTAGACAAAAAAGTGGAAGCTAATCTTAAAGCCATTGAAGAAATAAAGGCAGCAACAGATATGGCTTTGAAGAATGCAGAGATGGCAGATTCTGCAAAAGTGGCAGTTGAGGGTGAACTAAGGAAGTGGCGTCAAGAAGAACAAAAAGGGGTACCTGGTTTGGATTACTCTGATAATTCTCCAAGACCAATCTCCCTGAAAAGCTAA 1758 0.413 MSFRNRDHPQKEMTESPRGEVGEIDTRAPFQSVKAAVSLFGEVAVSKEKRAVKRRSSENVLEKETQLLLVQRELNKIKKQLDSAENTKAKAHSELDKANVTLQELTKKLNSVRESKQSAMEAAEDVKNQAKELEKALSQKAIGYEAWKQELEHARKEYTTTVKELDASKQELNKIRQDFDAALEAKLTAFQTAGEAQRSAKLNSEKVNELSKDIATMKASIEQLKLATAQAQEEQAKVMGEREAQLSYYKTAKEEAQMKMAALKNEYDPELTLSLEAKLAETSAEIQALQEQMKQAHASEMDSVRLITLEIKEATKTLQEVSEEESSLKNLEASLRTELEQVKKEQDELKEKEQAAEALAANLTGELQSSKEEEEAGSVEDKVSDVVDEMNMKIKQLSSETENAKREEKEMRTKSQELKQEAEKSRAVAEDLEQKLDVILKQAEEAKAAEQKAIEEMKLLSDAQGRVSVSDSNGKIILTVDEFAALSGKIKESEDLIERTEAAAMAQVEAINTRKTEVDKKVEANLKAIEEIKAATDMALKNAEMADSAKVAVEGELRKWRQEEQKGVPGLDYSDNSPRPISLKS* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01178 585 MobiDBLite consensus disorder prediction 1 22 - -
Rops11g01178 585 Coils Coil 67 140 - -
Rops11g01178 585 Coils Coil 246 266 - -
Rops11g01178 585 Coils Coil 207 237 - -
Rops11g01178 585 MobiDBLite consensus disorder prediction 368 389 - -
Rops11g01178 585 Coils Coil 304 373 - -
Rops11g01178 585 MobiDBLite consensus disorder prediction 563 585 - -
Rops11g01178 585 MobiDBLite consensus disorder prediction 344 426 - -
Rops11g01178 585 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 22 566 - -
Rops11g01178 585 Pfam Weak chloroplast movement under blue light 23 566 IPR008545 -
Rops11g01178 585 Coils Coil 272 299 - -
Rops11g01178 585 Coils Coil 144 185 - -
Rops11g01178 585 MobiDBLite consensus disorder prediction 399 426 - -
Rops11g01178 585 MobiDBLite consensus disorder prediction 1 25 - -
Rops11g01178 585 Coils Coil 387 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01178 Rops-Chr11 17302634 17305961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01178 - - gmx:100818297 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01178 11 17302634 17305961 Rops11g01178 11 17302634 17305961 ECH
Rops2g04615 2 84110214 84113065 Rops11g01178 11 17302634 17305961 PCT