Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01073 ATGAGCAAAGCAAGCATGTCATGCAAGAAGATAACATTCTATATCTTCTCGCAGGTTTTCTTAGGCCAAAGTGGAGGACTTGACTCTGATGGCAATGAACTTCCTCGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGTTTCCAACATCACAAGAAATCCGGTGCCATGAATGCACTTGTTCGAGTATCTGCTGTCCTTACTAATGGACCTTTCTTATTGAACCTCGATTGTGATCACTACATAAACAACAGCAAGGCCTTGGGGGAAGCTATGTGCTTTATGATGGATCCCAACCTTGGTAAACATGTTTGCTATGTCCAGTTTCCACAGAGGTTTGATGGTATTGATAGGAATGATCGATATGCCAATCGTAATACTGTTTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGTCCTGTTTATGTGGGTGCTGGATGTGTCTTCAATAGGACAGCTTTGTATGGTTATGAACCTCCGATTAAACCGAAGCATAAAAAGCCTGGGTTGCTATCATCACTCTGCGGTGGAAATCGGAAGAAGAGTTCAAAATCTAGTAAGAAAGGATCAGACAAGAAAAAATCTAGCAAGCATGTTGACCCAACTGTGCCCATCTTCAGTCTAGAGGATATAGAAGAAGGCGTAGAAGGTACTGGATTTGATGATGAGAAATCACTACTTTACTTCACTCATTGCCTTTTTCACAGACTAAGAGTTTCTGGAAATTGCAATGGGATTCGTATTCTAATGCGGCTTATGACTGTTATGTTAGCTATAAAAGGCCATCGAAGACTCCTCCTCTGTTGCTTATATCCACTTGCCGTTACTGACATTGATACCAATGGCGTCCATGCCCTTGAAGAGTTAATTAGAAGTCTTAAGAAGAGAGATGTTCGGTTTGACAGTCGAATATCAATTGCATCAGCTGTTATACAAAAGTTACAAGCAGATACTGTTAATAACTTGATAAGTACAAGAAGAATTTCTGCAGCAAAGAATGTGCCTAAGATCCAGGCGACCAAATTCTCCACCCCAAGGCTTCCAATCAGAAGTTTGGTGGCAGAAATGGGTTATCTAAATAACTACAATTTAGCTACCACCACCGCACATGTAAAAGAAGATCCTCACTACACTAACAGTTCTAGCAAAAGTACAACAAATTCCATGGAGGTTGTTAAGCTTCATTTGATTATGGAGATCGTAGCAGATAGAATGGAGATGCACAAGAATGTTGGAGTACAACGTGACAATTGGAACCACCTTCTATTGATATCTGTTAACATGATGACTCTCTCAGCTGCATCAATGGCTGGTCTTGCGGCCATTGCTTCAAGTGGAAGAGCACCACTTGTGGCACTGAAGGTTTCCTCCACAATTCTTTACATGGCAGCCACTGGCTTGCTTGTGATCATGAACAAAATCCAACCATCTCAGCTTGCAGAAGAACAGCGAAATGCTGCTAGGTTGTTTAAGCAGCTTCATGGAGAAATCAGAACTAGGATTTCTCTTGGGAATCCTACTGAAAATGATGTTACTGAAGCAATGGAGAAAGTTTTGGCATTGGACAGGGCTTACCCTCTTCCTTTGTTGGGCTCAATGTTAGAAAAGTTCCCTCAAACTGTGGAACCCGCTGTGTGGTGGCCTAGAAGGAAGCAAAGATATCATCAAAAACAAGAAAAGTTGGGTGGGCAATTGAAAGGGAATAATGGATGGGATGCAAGGTTGGAAAAGGAAATGAAAGATATTGTTAAGGTTTTGAGAAAGAAGGACATGGCAGACTACTTAAGGTTGAGTGAAAAAGTTTTAAACTTTAACAAAATATTAGCAGTTTCTGGTCCATTACTCACTGGCCTTGCAGCTTTGGGTTCTGGTTTTTTGGGTTCTGTGAATGCACCTTGGCCTGTGATGCTTGGGGTTATTGGGGGTGCTTTGGCAAGTGTTGTTAACACTTTAGAGCATGGTGGGCAAGTGGGGATGGTTTTTGAGTTGTATAGGGCAGCTGGTGGCTTCTTTAAGCTCATGGAAGAGAATATAGAGCTAAATATAAATGAACAAGATCCTCATAACAGAGAAAACGGGGAGCTTTTAGAAATCAAAGTTGCTTTACAACTAGGTAGGAGTCTCTCAGAACTAAGGCCATTTTCTGCTGGTTTTTCATCCTCAGATGAAGAAGAGAATGATTGTCAAGAGTTTGCTAGCAAGCTTTTCTAG 2220 0.4126 MSKASMSCKKITFYIFSQVFLGQSGGLDSDGNELPRLVYVSREKRPGFQHHKKSGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALGEAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGAGCVFNRTALYGYEPPIKPKHKKPGLLSSLCGGNRKKSSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGTGFDDEKSLLYFTHCLFHRLRVSGNCNGIRILMRLMTVMLAIKGHRRLLLCCLYPLAVTDIDTNGVHALEELIRSLKKRDVRFDSRISIASAVIQKLQADTVNNLISTRRISAAKNVPKIQATKFSTPRLPIRSLVAEMGYLNNYNLATTTAHVKEDPHYTNSSSKSTTNSMEVVKLHLIMEIVADRMEMHKNVGVQRDNWNHLLLISVNMMTLSAASMAGLAAIASSGRAPLVALKVSSTILYMAATGLLVIMNKIQPSQLAEEQRNAARLFKQLHGEIRTRISLGNPTENDVTEAMEKVLALDRAYPLPLLGSMLEKFPQTVEPAVWWPRRKQRYHQKQEKLGGQLKGNNGWDARLEKEMKDIVKVLRKKDMADYLRLSEKVLNFNKILAVSGPLLTGLAALGSGFLGSVNAPWPVMLGVIGGALASVVNTLEHGGQVGMVFELYRAAGGFFKLMEENIELNINEQDPHNRENGELLEIKVALQLGRSLSELRPFSAGFSSSDEEENDCQEFASKLF* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01073 739 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 324 739 IPR027949 -
Rops11g01073 739 Pfam Cellulose synthase 18 230 IPR005150 GO:0016020|GO:0016760|GO:0030244
Rops11g01073 739 FunFam Cellulose synthase 23 165 - -
Rops11g01073 739 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 29 161 IPR029044 -
Rops11g01073 739 MobiDBLite consensus disorder prediction 170 202 - -
Rops11g01073 739 Pfam Petal formation-expressed 396 715 IPR027949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01073 Rops-Chr11 15798830 15807350 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01073 18 230 Glycosyltransferase AT5G05170 86.854 1.15e-119 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01073 - - gmx:100801646 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01073 11 15798830 15807350 Rops11g01073 11 15798830 15807350 ECH