Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00496 ATGTCTTTATGTTGTTCAAGCTTTGGTACAATAATCCCACGTATCTTGAGACATCGTAGGAGATACGATGATGCTTCTTTCACACTGACCCATGTTGGTTCCTGCTCCATCTCACCCCACTATAAAGTCCCCTCCTTCAACTACAACTACAACCTCTCAAGCCACATTGATTTTGTTTCAAAATTCGACCAAGCTTTTTCTTCTCCTGTTATGGAGGAGGACCATGATGAAAAGTTTGGTCCTTTTTCTGAAGCAGAAAAGGAGTATTCCAAGGAATTGGAAGTTGCTGTCAGAGCAGTGCAGATGGCATGCTCTCTTTGCCAGAGAGTGCAGGATACTTTGATTTCCGAAACCAAGAGCAATCACCAGGTTCAGTCCAAGGATGACAATTCTCCTGTTACAGTAGCAGATTGGAGTGTCCAAGCAATTGTCAGCTGGATATTGTCTGAGTGCTTAGGGGGTGAAAACATCTCAATTGTAGCTGAAGAAGATGTTCAAACTCTTTCCAAGGCTAATGCATCTGAGCTATTAGAAGCTGTGGTGGAAACTGTGAATGAATGTCTAGCTGAAGCACCACGATTTGGAGTTCACGAGCCAAAATCAACTCTTGGGGCTTCAGAAGTTCTTGAAATTATTAGTCGCTGCAACTCAATTGGGGGTCCCACTGGAAGATTTTGGGTACTGGATCCTGTTGATGGCACATTGGGGTTTGTTCGTGGAGACCAATATGCAGTAGCTCTAGCACTCATAGAGGATGGAGAAGTTGTGCTTGGTGTTCTTGGGTGTCCTAACTACCCAATGAGGAAGGAATGGTTAAGTTATCATCACCGCTATCATAGGATTGTATCCAAGCTGACTCCTCCATCTTCTGAAAGTTGGAACAAAGGTTGTGTGCTATATGCTAAAAGGGGCAGTGGCAAGGCTTGGATGCAACCGCTGCTCCATGTCAATAAGATGTATGTGTGGCCAAACCATGCAAAACAAGTTTCTGTCTCTTCCATTGACAATCCAGCACAGGCCACTTTTTGTGAACCAGTTGAGAAGGCCAATTCAAGCCATTCCTTTACTGCAGGACTGGCTCACAGTGTTGGTCTCAGGAAACAACCATTAAGAGTATACAGCATGGTGAAATATGCAGCAATAGCTCGTGGGGATGCTGAGGTTTTCATGAAGTTTGCAAGGGCTGGTTACAAGGAGAAAATATGGGATCATGCTGCAGGTGTTATCATCATACAGGAAGCTGGTGGGATGGTAACAGATGCTGGAGGATTTCCCCTAGACTTCTCAAAAGGCTTATATTTAGAAGGCCTTGATCGTGGTATAATTGCTTGTTCTGGAGCCACACTACATGGAAAGATCATTGATGCTGTTGATGCCAGCTGGGGCTCTTCTAGCCTTTGA 1401 0.4447 MSLCCSSFGTIIPRILRHRRRYDDASFTLTHVGSCSISPHYKVPSFNYNYNLSSHIDFVSKFDQAFSSPVMEEDHDEKFGPFSEAEKEYSKELEVAVRAVQMACSLCQRVQDTLISETKSNHQVQSKDDNSPVTVADWSVQAIVSWILSECLGGENISIVAEEDVQTLSKANASELLEAVVETVNECLAEAPRFGVHEPKSTLGASEVLEIISRCNSIGGPTGRFWVLDPVDGTLGFVRGDQYAVALALIEDGEVVLGVLGCPNYPMRKEWLSYHHRYHRIVSKLTPPSSESWNKGCVLYAKRGSGKAWMQPLLHVNKMYVWPNHAKQVSVSSIDNPAQATFCEPVEKANSSHSFTAGLAHSVGLRKQPLRVYSMVKYAAIARGDAEVFMKFARAGYKEKIWDHAAGVIIIQEAGGMVTDAGGFPLDFSKGLYLEGLDRGIIACSGATLHGKIIDAVDASWGSSSL* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00496 466 ProSitePatterns Inositol monophosphatase family signature 2. 402 416 IPR020550 GO:0046854
Rops11g00496 466 FunFam PAP-specific phosphatase HAL2-like 87 319 - -
Rops11g00496 466 SUPERFAMILY Carbohydrate phosphatase 89 459 - -
Rops11g00496 466 Gene3D - 87 319 - -
Rops11g00496 466 PANTHER PHOSPHATASE 80 464 - -
Rops11g00496 466 FunFam PAP-specific phosphatase HAL2-like 330 463 - -
Rops11g00496 466 ProSitePatterns Inositol monophosphatase family signature 1. 226 239 IPR020583 -
Rops11g00496 466 CDD PAP_phosphatase 92 457 - -
Rops11g00496 466 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 89 465 IPR006239 GO:0006790|GO:0008441
Rops11g00496 466 Gene3D - 330 460 - -
Rops11g00496 466 Pfam Inositol monophosphatase family 129 460 IPR000760 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00496 Rops-Chr11 6763633 6767779 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00496 K01082 - gmx:100776247 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00496 11 6763633 6767779 Rops11g00496 11 6763633 6767779 ECH
Rops2g01999 2 31695851 31699721 Rops11g00496 11 6763633 6767779 PCT