Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00489 ATGCGCTCTGTGAAAGTCATCGTCGTTTCCGCCGCCGTTGTTTTCACGGCGTTGGGAGTGAAGGCCTCTTTTCCATTCATCACCACACACCTCCCTCTCCTCTGGAGCTTCTTCCGCTTATGCTTCAAACCACCCTACCTCTACGTCATCGTCAACGCCATCATCATCTCCATCGTCGCCTCCTCCAGATTCCTCCACTCCACCGCCGAAGCCAATCTCCACATGGAGCCAACTCCTCCGCCTGTTCTGGAGGTGAAGACAGTCCTGGTTACTGGTTCACCCACGGTCGAGGAAGAAGAAGAAGAAATAGAAACAGAAGAAGAAGAGAAGCGAGTAATCGTGCTGAAGAGGATGGACTCGCCGGAGATTCCACCGGAATATCCATCGGTGGTGCAGAAACCTCTCGTTTCTGCCAGGTTTGGTCACCGGAAACCGGTTAAATCGAGTCCTGAAGGTGGGAGAGCATTGAGGGTGGCGAAGCCGAAACGGCACGAGACGTTGGAGAATACGTGGAAGGCGATAACGGAGGGTCGATCCATGCCGTTAAGCAGACACATGAAGAAGTGTGACACGTGGCAAAACCGTGGGGACACGGACCCACTTGAAGCCACCCCTACTGTGAAGAAGTGTGAAACCTTCAAGGATGGGACAAATAAGCCGAAGCTGAGGAAAGAACCTTCGCTAAGTCAGGACGAGTTGAATAGGCGCGTGGAAGCGTTCATACGCAACTTCAACGAGCAAATGAGGTTGCAAAGACAAGAATCCTTAAATCAATACATGCAAATGGTTAACCGTGGTACCAGCTAA 807 0.518 MRSVKVIVVSAAVVFTALGVKASFPFITTHLPLLWSFFRLCFKPPYLYVIVNAIIISIVASSRFLHSTAEANLHMEPTPPPVLEVKTVLVTGSPTVEEEEEEIETEEEEKRVIVLKRMDSPEIPPEYPSVVQKPLVSARFGHRKPVKSSPEGGRALRVAKPKRHETLENTWKAITEGRSMPLSRHMKKCDTWQNRGDTDPLEATPTVKKCETFKDGTNKPKLRKEPSLSQDELNRRVEAFIRNFNEQMRLQRQESLNQYMQMVNRGTS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00489 268 Pfam Cotton fibre expressed protein 230 265 IPR008480 -
Rops11g00489 268 Coils Coil 96 116 - -
Rops11g00489 268 Pfam Domain of unknown function (DUF4408) 32 64 IPR025520 -
Rops11g00489 268 PANTHER COTTON FIBER (DUF761) 22 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00489 Rops-Chr11 6686457 6687647 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00489 - - pcin:129307107 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00489 11 6686457 6687647 Rops11g00489 11 6686457 6687647 ECH