Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00472 ATGGCAACAGAGGAATCGCAACCCAAGCTCTGCACCTGTTTCTTCAACAAGCTTCCCTTTCGCCATTGGACTACCCCTTCTTCTTCAACTGCTTCTTCCAATTCCGTTTCTTCTCTTGTCAGATCCTGCCTCCCTACACGACGTCGTCTCAAGCTCGATCCTTCCAATAACCTTTACTTCCCTTATGAGCCAGGCAAGCAGGTCAAGAGTGCCATCACGATTAAAAACACCAGTAAATCCAATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAAAGCTGTTTCATGCGCCATCCTGGGGCCATTCTTGCTCCTAGCGAGAGTATAATTGCAACTGTGTTCAAGTTTGTAGAGCACCCAGAAAATAATGAAAAGCCAGAAAAAACTGAACTCAAATTTAAAATCATGAGCTTGAAGGTCAAAGGATCAACTGATTATGTCCCTGAGCTGTTTGATGAGCAGAAGGACCAAGTAGTAGTGGAGCAGATTTTGCAGGTTGTTTTTCTGGATCCAGAGCATCCTAGCGCTGCTCTGGAAAAACTAAAGCGGCAGCTGGCCGAGGCTGATGATGCACTTAATAAAGCACGTAAGAAATCCTCTGAAGAAGCAGGTCCCAAGATTATTGGGGAAGGGCTTGTCATAGATGAATGGAAAGAGAGGAGGGAAAGATACCTCGCAAAGCAGCAGGGTGAAGTGGTAATGGACTCTGTATAG 714 0.4538 MATEESQPKLCTCFFNKLPFRHWTTPSSSTASSNSVSSLVRSCLPTRRRLKLDPSNNLYFPYEPGKQVKSAITIKNTSKSNVAFKFQTTAPKSCFMRHPGAILAPSESIIATVFKFVEHPENNEKPEKTELKFKIMSLKVKGSTDYVPELFDEQKDQVVVEQILQVVFLDPEHPSAALEKLKRQLAEADDALNKARKKSSEEAGPKIIGEGLVIDEWKERRERYLAKQQGEVVMDSV* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00472 237 Gene3D Immunoglobulins 45 173 IPR013783 -
Rops11g00472 237 Pfam MSP (Major sperm protein) domain 50 158 IPR000535 -
Rops11g00472 237 ProSiteProfiles Major sperm protein (MSP) domain profile. 49 169 IPR000535 -
Rops11g00472 237 Coils Coil 178 198 - -
Rops11g00472 237 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 48 228 IPR016763 GO:0005789
Rops11g00472 237 SUPERFAMILY PapD-like 39 178 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00472 Rops-Chr11 6353249 6356686 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00472 - - gmx:100808835 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00472 11 6353249 6356686 Rops11g00472 11 6353249 6356686 ECH