Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00392 ATGGGAAATCTTGCCCATGCTCAAGACTCACATCAAGACTATGTCAATGCCCACAATGCTGCAAGATCAGAGGTGAAAGTTCCAAATTTGGTTTGGGATGATACAGTTGCTGCTTTTGCACAGAGCTATGCTGAACAACGCAAGGGCGATTGCCAATTGGTCCACTCAGGTGGTGGTGGACGTTACGGGGAGAACCTCGCAATGAGCACTGGTGACCTAAGTGGCACAGACGCAGTGAAACTGTGGGTGAATGAGAAAGCCAAATATGACTACAATTCTAACTCCTGTGTTGGAGGTGAGTGCTGCCACTATACTCAGGTTGTTTGGAAGAACACAACACGTGTTGGATGTGCCAAAGTAAAATGTAATAATGGAGGCACATTCATCGGTTGCAACTATGACCCTCCTGGTAACTATGTTGGCCAAAAACCCTACTAA 438 0.4635 MGNLAHAQDSHQDYVNAHNAARSEVKVPNLVWDDTVAAFAQSYAEQRKGDCQLVHSGGGGRYGENLAMSTGDLSGTDAVKLWVNEKAKYDYNSNSCVGGECCHYTQVVWKNTTRVGCAKVKCNNGGTFIGCNYDPPGNYVGQKPY* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00392 145 CDD CAP_PR-1 12 145 - -
Rops11g00392 145 SMART SCP_3 9 141 IPR014044 -
Rops11g00392 145 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 10 142 IPR001283 -
Rops11g00392 145 Pfam Cysteine-rich secretory protein family 15 133 IPR014044 -
Rops11g00392 145 SUPERFAMILY PR-1-like 9 145 IPR035940 -
Rops11g00392 145 Gene3D CAP 4 145 IPR035940 -
Rops11g00392 145 FunFam Putative pathogenesis-related protein 1 8 145 - -
Rops11g00392 145 ProSitePatterns CRISP family signature 2. 128 139 IPR018244 GO:0005576
Rops11g00392 145 PRINTS Allergen V5/Tpx-1 family signature 30 48 IPR001283 -
Rops11g00392 145 PRINTS Allergen V5/Tpx-1 family signature 101 117 IPR001283 -
Rops11g00392 145 PRINTS Allergen V5/Tpx-1 family signature 128 141 IPR001283 -
Rops11g00392 145 PRINTS Allergen V5/Tpx-1 family signature 78 91 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00392 Rops-Chr11 5365939 5366587 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00392 K13449 - gmx:100805116 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00392 11 5365939 5366587 Rops11g00392 11 5365939 5366587 ECH