Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00389 ATGGGGTTATGCTATGTTTCGTTTTCTCTACTCTGTATCTTGGGCTTAGTCATCATGGGAGTTGTTGTCTATGCTCAAGACTCGCCACAAGACTTTGTCAATGCCCACAACGCTGCAAGATCAGAGGTGAATGTTCCAAATTTGGTTTGGGATGATACTGTTGCTGCTTTTGCAAAAAGCTATGCTGATCAACGTAAGGGTGATTGCCAATTGGTCCACTCAGGTGGTGGTGGACGTTACGGGGAGAACCTCGCAATGAGCCCTGGTGACCTAAGTGGCACAGACGCAGTGAAAATGTGGGTGAATGAGAAAGCCAACTATGACTACAATTCTAACTCCTGTGTTGGTGGGGAGTGCCTGCACTATACTCAGGTTGTTTGGAAAAACTCACAACGCCTTGGATGTGCCAAAGTAAGATGTGATAATGGAGGCACATTCATCGGTTGCAACTATGACCCTCCTGGTAACTATGTTGGCCAAAAACCCTACTAA 492 0.4614 MGLCYVSFSLLCILGLVIMGVVVYAQDSPQDFVNAHNAARSEVNVPNLVWDDTVAAFAKSYADQRKGDCQLVHSGGGGRYGENLAMSPGDLSGTDAVKMWVNEKANYDYNSNSCVGGECLHYTQVVWKNSQRLGCAKVRCDNGGTFIGCNYDPPGNYVGQKPY* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00389 163 ProSitePatterns CRISP family signature 2. 146 157 IPR018244 GO:0005576
Rops11g00389 163 PRINTS Allergen V5/Tpx-1 family signature 146 159 IPR001283 -
Rops11g00389 163 PRINTS Allergen V5/Tpx-1 family signature 119 135 IPR001283 -
Rops11g00389 163 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Rops11g00389 163 PRINTS Allergen V5/Tpx-1 family signature 96 109 IPR001283 -
Rops11g00389 163 FunFam Putative pathogenesis-related protein 1 26 163 - -
Rops11g00389 163 CDD CAP_PR-1 29 163 - -
Rops11g00389 163 SMART SCP_3 27 159 IPR014044 -
Rops11g00389 163 Pfam Cysteine-rich secretory protein family 33 151 IPR014044 -
Rops11g00389 163 Gene3D CAP 27 163 IPR035940 -
Rops11g00389 163 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 30 160 IPR001283 -
Rops11g00389 163 SUPERFAMILY PR-1-like 24 163 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00389 Rops-Chr11 5315764 5316255 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00389 K13449 - gmx:100805116 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00389 11 5315764 5316255 Rops11g00389 11 5315764 5316255 ECH